RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CCDC22O60826 627 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 LGR5O75473 907 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 RTN3O95197 1032 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 TFE3P19532 575 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 GRIA1P42261 906 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 STILQ15468 1287 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 TSNAXIP1Q2TAA8 658 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 LRRC23Q53EV4 343 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 LCLAT1Q6UWP7 414 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 MYLK4Q86YV6 388 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 PYROXD2Q8N2H3 581 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 TTC39CQ8N584 583 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 PPFIBP2Q8ND30 876 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 APPL2Q8NEU8 664 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 SLC2A14Q8TDB8 520 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 DENND1AQ8TEH3 1009 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 PTPRN2Q92932 1015 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 APOPT1Q96IL0 206 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 NSL1Q96IY1 281 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 LGMNQ99538 433 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 TSC22D3Q99576 134 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 EIF2AQ9BY44 585 aaKnown RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 NXF3Q9H4D5 531 aaKnown RBP7.96□□□□□ -1.14
HDAC9-201ENST00000401921 NRDE2Q9H7Z3 1164 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 PTPRHQ9HD43 1115 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 ARHGEF3Q9NR81 526 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 IL1RAPL1Q9NZN1 696 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 C15orf41Q9Y2V0 281 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 PHIPQ8WWQ0 1821 aa7.96□□□□□ -1.14
HDAC9-201ENST00000401921 A0A0G2JLL6 359 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 C3orf70A6NLC5 250 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 CXorf49A8MYA2 514 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 H3BRJ5 948 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 M0QYT0 321 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 KCNK1O00180 336 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PAPSS1O43252 624 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TYROBPO43914 113 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TSPAN1O60635 241 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 SMIM24O75264 130 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 USP12O75317 370 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 SPAG6O75602 509 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 CIB2O75838 187 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 RECQL4O94761 1208 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 OAS1P00973 400 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 GOT1P17174 413 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PTPN4P29074 926 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TYK2P29597 1187 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 STX3Q13277 289 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TRMT10BQ6PF06 316 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PRRT2Q7Z6L0 340 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TTC30AQ86WT1 665 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TRIM42Q8IWZ5 723 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 HIPK4Q8NE63 616 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TTC8Q8TAM2 541 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 DCAKDQ8WVC6 231 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 DNAJB3Q8WWF6 145 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ZNF395Q9H8N7 513 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 LMCD1Q9NZU5 365 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 RGS17Q9UGC6 210 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PRKAG3Q9UGI9 489 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TIMM13Q9Y5L4 95 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 IGKV6-21A0A0C4DH24 114 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ABLIM1O14639 778 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 XPOTO43592 962 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 MYL3P08590 195 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 NCF2P19878 526 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PGM1P36871 562 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PAPOLAP51003 745 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 RABGGTBP53611 331 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 YWHAZP63104 245 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 DBN1Q16643 649 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 DGKDQ16760 1214 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 GALNTL6Q49A17 601 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 BZW1Q7L1Q6 419 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 CLNKQ7Z7G1 428 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ZNF354CQ86Y25 554 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 WDR75Q8IWA0 830 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 LMNTD2Q8IXW0 634 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 DEFB106AQ8N104 65 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ARHGAP24Q8N264 748 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 BANPQ8N9N5 519 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 COLGALT1Q8NBJ5 622 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PPP4R1Q8TF05 950 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TFB1MQ8WVM0 346 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 APOL2Q9BQE5 337 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 TMEM165Q9HC07 324 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 SMYD2Q9NRG4 433 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ZFATQ9P243 1243 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 MTO1Q9Y2Z2 717 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 ZNFX1Q9P2E3 1918 aaKnown RBP7.95□□□□□ -1.14
HDAC9-201ENST00000401921 MCM3APO60318 1980 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 CCL15-CCL14A0A0B4J2E2 113 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 PDHXO00330 501 aa7.95□□□□□ -1.14
HDAC9-201ENST00000401921 CLDN5O00501 218 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms