RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TUSC3Q13454 348 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HP1BP3Q5SSJ5 553 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FAM47EQ6ZV65 393 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TMCO2Q7Z6W1 182 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GIMAP7Q8NHV1 300 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 LRRC8CQ8TDW0 803 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SLC9A7Q96T83 725 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZWILCHQ9H900 591 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PHTF1Q9UMS5 762 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 USH1CQ9Y6N9 552 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TBKBP1A7MCY6 615 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PIRO00625 290 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TYROBPO43914 113 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CST8O60676 142 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZWINTO95229 277 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CA4P22748 312 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KDELR1P24390 212 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GPX6P59796 221 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RBP5P82980 135 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PDE4CQ08493 712 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DNAJC3Q13217 504 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 E2F5Q15329 346 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KLHL38Q2WGJ6 581 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HHATQ5VTY9 493 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 NAT8LQ8N9F0 302 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PYROXD1Q8WU10 500 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RSAD2Q8WXG1 361 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 BCO2Q9BYV7 579 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RABGEF1Q9UJ41 708 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TDRD15B5MCY1 1934 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FNDC1Q4ZHG4 1894 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CLUHO75153 1309 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 E7ESA3 106 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 EDF1O60869 148 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DCTN3O75935 186 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DDHD2O94830 711 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 UNC5CO95185 931 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ALDH3A1P30838 453 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GBP2P32456 591 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RPA3P35244 121 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DYNLT1P63172 113 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HTRA4P83105 476 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RNASELQ05823 741 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ACAP1Q15027 740 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 C9orf57Q5W0N0 161 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CAPN12Q6ZSI9 719 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZNF280BQ86YH2 543 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ARFGAP1Q8N6T3 406 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CPT1BQ92523 772 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 UROC1Q96N76 676 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RAB3IPQ96QF0 476 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DHRS4Q9BTZ2 278 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KIF9Q9HAQ2 790 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GOLGA2P5Q9HBQ8 144 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 POLIQ9UNA4 740 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 COL4A6Q14031 1691 aa16.54■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KRT19P08727 400 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KRT16P08779 473 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 IL1R2P27930 398 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ATICP31939 592 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RPL22P35268 128 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SHHQ15465 462 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 UPP1Q16831 310 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FAM117BQ6P1L5 589 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ANKMY2Q8IV38 441 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HERC6Q8IVU3 1022 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 COLGALT2Q8IYK4 626 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 LRRC43Q8N309 656 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TMEM130Q8N3G9 435 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ACSS3Q9H6R3 686 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SYNCQ9H7C4 482 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GOLGA8MH3BSY2 632 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MSH2P43246 934 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CLCNKBP51801 687 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RAD23BP54727 409 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SLC1A5Q15758 541 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SMTNL2Q2TAL5 461 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ANKRD22Q5VYY1 191 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ADGRD1Q6QNK2 874 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 XYLT1Q86Y38 959 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CMTR2Q8IYT2 770 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KIF2BQ8N4N8 673 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 LRRC52Q8N7C0 313 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KCTD6Q8NC69 237 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CMASQ8NFW8 434 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ALKBH8Q96BT7 664 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TBC1D31Q96DN5 1066 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms