RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 GABBR2O75899 941 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 FBXO21O94952 628 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 KLF8O95600 359 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 KRT5P13647 590 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 LCP1P13796 627 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 PRKCSHP14314 528 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 CORO1AP31146 461 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 TIE1P35590 1138 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 MTIF2P46199 727 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 RPL34P49207 117 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 MFAP3P55082 362 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 TRIP4Q15650 581 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 MAN2A1Q16706 1144 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 EOGTQ5NDL2 527 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 MSANTD2Q6P1R3 559 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 TPGS1Q6ZTW0 290 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 CACNA2D4Q7Z3S7 1137 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 TRMT11Q7Z4G4 463 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 CREBRFQ8IUR6 639 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 FAM217AQ8IXS0 508 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 CCDC33Q8N5R6 958 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 FAM160A2Q8N612 972 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 ALLCQ8N6M5 410 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 TXNDC5Q8NBS9 432 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 RNF139Q8WU17 664 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 NDRG1Q92597 394 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 ZC3H10Q96K80 434 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 DNAJC17Q9NVM6 304 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 FBXO10Q9UK96 956 aa15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 AGO1Q9UL18 857 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-203ENST00000399299 PLXND1Q9Y4D7 1925 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 SGK1O00141 431 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 MED7O43513 233 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 ALDH1A2O94788 518 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 LATS1O95835 1130 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 PENKP01210 267 aaPredicted RBP15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 GPD2P43304 727 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 ID4P47928 161 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 RGS7P49802 495 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 LMNB2Q03252 620 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 C10orf76Q5T2E6 689 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 EMC10Q5UCC4 262 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 FYB2Q5VWT5 728 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 FMNL3Q8IVF7 1028 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 ZNF513Q8N8E2 541 aaPredicted RBP15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 STK32AQ8WU08 396 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 PARD6AQ9NPB6 346 aa15.55■□□□□ 0.08
SMIM11A-203ENST00000399299 TRIM24O15164 1050 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 SART1O43290 800 aaKnown RBP15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 ADAM23O75077 832 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 CALCAP01258 141 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 LTFP02788 710 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 HMBSP08397 361 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 SLC9A1P19634 815 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 PON1P27169 355 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 GNA15P30679 374 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 ACADSBP45954 432 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 HARS2P49590 506 aaKnown RBP15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 DGKGP49619 791 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 ZNF445P59923 1031 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 TMEM92Q6UXU6 159 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 KBTBD6Q86V97 674 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 C11orf74Q86VG3 221 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 DENND1CQ8IV53 801 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 ZNF606Q8WXB4 792 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 SHC3Q92529 594 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 EDEM1Q92611 657 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 GOLGA1Q92805 767 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 NDST4Q9H3R1 872 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 POLMQ9NP87 494 aaPredicted RBP15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 USP18Q9UMW8 372 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 SLC27A6Q9Y2P4 619 aa15.54■□□□□ 0.08
SMIM11A-203ENST00000399299 BECN2A8MW95 431 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 PRR5-ARHGAP8B1AHC4 643 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 FOXD2O60548 495 aaPredicted RBP15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 LETM1O95202 739 aaPredicted RBP15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 EPN2O95208 641 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 CYBBP04839 570 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 CISD3P0C7P0 127 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 HNRNPLP14866 589 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 NTSR1P30989 418 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 ARHGAP8P85298 464 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 SPEM2Q0P670 501 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 CSRP2Q16527 193 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 PLK5Q496M5 336 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 VWA3BQ502W6 1294 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 USP39Q53GS9 565 aaKnown RBP15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 ANO7Q6IWH7 933 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 RBM43Q6ZSC3 357 aaKnown RBP15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 TOGARAM2Q6ZUX3 1019 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 MDGA1Q8NFP4 955 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 P2RY11Q96G91 374 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 SIX2Q9NPC8 291 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 SEMA4GQ9NTN9 838 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 STOML2Q9UJZ1 356 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 HCN2Q9UL51 889 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 PCDHGA5Q9Y5G8 931 aa15.53■□□□□ 0.08
SMIM11A-203ENST00000399299 SDK1Q7Z5N4 2213 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms