RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GRM2Q14416 872 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PPP1R2P3Q6NXS1 205 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MTSS1LQ765P7 747 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARCQ7LC44 396 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF653Q96CK0 615 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NPY6RQ99463 290 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KIF9Q9HAQ2 790 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZFP14Q9HCL3 533 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OLA1Q9NTK5 396 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OBP2AQ9NY56 170 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SIGLEC16A6NMB1 481 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARNTLO00327 626 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 IRAK2O43187 625 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CYP1A2P05177 515 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 KRT3P12035 628 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NOS2P35228 1153 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GSDMDP57764 484 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FCHO2Q0JRZ9 810 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DCAF6Q58WW2 860 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 Q6ZNB5 142 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RNF135Q8IUD6 432 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TMTC1Q8IUR5 882 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MFSD6LQ8IWD5 586 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CCDC170Q8IYT3 715 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GJD3Q8N144 294 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SLC44A3Q8N4M1 653 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RXFP2Q8WXD0 754 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GOLGA1Q92805 767 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 P2RY11Q96G91 374 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SLC39A13Q96H72 371 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CFAP57Q96MR6 1250 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TBCBQ99426 244 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 IGSF9Q9P2J2 1179 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 I6L893 689 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DPYSL4O14531 572 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NDUFA10O95299 355 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 HMBSP08397 361 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 IRF1P10914 325 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CCZ1BP86790 482 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CCZ1P86791 482 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NNTQ13423 1086 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 C15orf59Q2T9L4 293 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 IER5LQ5T953 404 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DEPDC1BQ8WUY9 529 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NXPE3Q969Y0 559 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRIM11Q96F44 468 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ZFYVE19Q96K21 471 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FAM83CQ9BQN1 747 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NACA2Q9H009 215 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ANLNQ9NQW6 1124 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PLSCR2Q9NRY7 297 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PIGVQ9NUD9 493 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MYO1AQ9UBC5 1043 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 HBS1LQ9Y450 684 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TICRRQ7Z2Z1 1910 aa12.94□□□□□ -0.34
HLA-DQB1-203ENST00000399082 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CAPN9O14815 690 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ENDOD1O94919 500 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 H2AFZP0C0S5 128 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TMEM253P0C7T8 217 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MYBL1P10243 752 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PSMC3P17980 439 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PTPN9P43378 593 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GPC5P78333 572 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SLC25A52Q3SY17 297 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 HTR3DQ70Z44 454 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 H2AFVQ71UI9 128 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms