RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 PAAF1Q9BRP4 392 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 C2orf40Q9H1Z8 148 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 KANSL3Q9P2N6 904 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 CITO14578 2027 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 REV3LO60673 3130 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ZNF865P0CJ78 1059 aaPredicted RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 CDKN2BP42772 138 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 SLC18A1P54219 525 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ATXN1P54253 815 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 PTPN11Q06124 597 aaPredicted RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 TRNP1Q6NT89 227 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 C1orf228Q6PIY5 440 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 RINLQ6ZS11 566 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 XYLT1Q86Y38 959 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 RFX6Q8HWS3 928 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 RELL1Q8IUW5 271 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 SCUBE3Q8IX30 993 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 KBTBD2Q8IY47 623 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ARRDC4Q8NCT1 418 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 MAK16Q9BXY0 300 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 RNF186Q9NXI6 227 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 STX18Q9P2W9 335 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 E5RJQ4 531 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TYROBPO43914 113 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 RECQL4O94761 1208 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 KRT4P19013 534 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TFE3P19532 575 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 ADRA1DP25100 572 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 LMO2P25791 158 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 TMEM132DQ14C87 1099 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 FAXCQ5TGI0 409 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TDRPQ86YL5 185 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 UNC45BQ8IWX7 931 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 RCOR2Q8IZ40 523 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 FAM71DQ8N9W8 422 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CFAP61Q8NHU2 1237 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 PTCD3Q96EY7 689 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 VCPIP1Q96JH7 1222 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 KLF6Q99612 283 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 MRPL45Q9BRJ2 306 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 TUBB6Q9BUF5 446 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ALG13Q9NP73 1137 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 DPP3Q9NY33 737 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TNFSF13BQ9Y275 285 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 SCN1AP35498 2009 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CLDN5O00501 218 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 B4GALT4O60513 344 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ESRRAP11474 423 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 MIPP30301 263 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ABCD1P33897 745 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ERFP50548 548 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 NEK3P51956 506 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TFDP3Q5H9I0 405 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CEP128Q6ZU80 1094 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 FAM81AQ8TBF8 368 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CLEC4CQ8WTT0 213 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ADPGKQ9BRR6 497 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 DMAP1Q9NPF5 467 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 FBXO6Q9NRD1 293 aaPredicted RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 KRT82Q9NSB4 513 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CASTOR2A6NHX0 329 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 GOLGA8RI6L899 631 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 POMCP01189 267 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 CCDC130P13994 396 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 YY1P25490 414 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 SERPINB3P29508 390 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 SSTR1P30872 391 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 PSEN2P49810 448 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ARFIP2P53365 341 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
RCC1-204ENST00000398958 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TTC25Q96NG3 672 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TRIM55Q9BYV6 548 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TAS2R1Q9NYW7 299 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 MORF4L1Q9UBU8 362 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 TSPAN16Q9UKR8 245 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 NME7Q9Y5B8 376 aa11.73□□□□□ -0.53
RCC1-204ENST00000398958 SIP14410 1827 aa11.72□□□□□ -0.53
RCC1-204ENST00000398958 AVILO75366 819 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms