RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 C12orf50Q8NA57 414 aaPredicted RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 TXNDC5Q8NBS9 432 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 ZC3H10Q96K80 434 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 XPO6Q96QU8 1125 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 BBS2Q9BXC9 721 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 ZNF510Q9Y2H8 683 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 EML5Q05BV3 1969 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 NBEAQ8NFP9 2946 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 ABCA7Q8IZY2 2146 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 ANTXRLA6NF34 631 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 NEDD8-MDP1E9PL57 170 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 TULP2O00295 520 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 ALDH1A2O94788 518 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 KLF8O95600 359 aaPredicted RBP14.06□□□□□ -0.16
VCX3A-202ENST00000398729 TYRP14679 529 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 KIR2DL1P43626 348 aaPredicted RBP14.06□□□□□ -0.16
VCX3A-202ENST00000398729 GCNT1Q02742 428 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 EOGTQ5NDL2 527 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 EMC10Q5UCC4 262 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 PM20D1Q6GTS8 502 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 GRAMD4Q6IC98 578 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 TCEAL6Q6IPX3 200 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 ANO7Q6IWH7 933 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 Q6ZNB5 142 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 TERB1Q8NA31 727 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 IL17RCQ8NAC3 791 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 EHBP1Q8NDI1 1231 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 LMO3Q8TAP4 145 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 UBA3Q8TBC4 463 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 KCNV2Q8TDN2 545 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 TCEAL3Q969E4 200 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 ULBP1Q9BZM6 244 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 DCLK3Q9C098 648 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 DNAJC17Q9NVM6 304 aaKnown RBP14.06□□□□□ -0.16
VCX3A-202ENST00000398729 MARK1Q9P0L2 795 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 MARCH2Q9P0N8 246 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 RWDD2AQ9UIY3 292 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 WASF3Q9UPY6 502 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 GON4LQ3T8J9 2241 aa14.06□□□□□ -0.16
VCX3A-202ENST00000398729 C1QTNF9BB2RNN3 333 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 GIPC1O14908 333 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 CACNG3O60359 315 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 C1QTNF9P0C862 333 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 CHKAP35790 457 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 ADIGQ0VDE8 80 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 STILQ15468 1287 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 PLK5Q496M5 336 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 USP39Q53GS9 565 aaKnown RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 LCLAT1Q6UWP7 414 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 TRMT11Q7Z4G4 463 aaKnown RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 SIX6OS1Q8N1H7 587 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 KCTD13Q8WZ19 329 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 KAT5Q92993 513 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 CNOT6LQ96LI5 555 aaKnown RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 DUSP15Q9H1R2 295 aaPredicted RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 POLMQ9NP87 494 aaPredicted RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 CNGB3Q9NQW8 809 aa14.05□□□□□ -0.16
VCX3A-202ENST00000398729 OLA1Q9NTK5 396 aaKnown RBP14.05□□□□□ -0.16
VCX3A-202ENST00000398729 SLC12A8A0AV02 714 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 SGK1O00141 431 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 KLKB1P03952 638 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 HMBSP08397 361 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 CORO1AP31146 461 aaKnown RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 MPLP40238 635 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 ELF2Q15723 593 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 CNGA2Q16280 664 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 PKDCCQ504Y2 493 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 C11orf74Q86VG3 221 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 MLKLQ8NB16 471 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 RBBP8NLQ8NC74 664 aaPredicted RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 RNF139Q8WU17 664 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 SLC35F5Q8WV83 523 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 NDRG1Q92597 394 aaKnown RBP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 TPSD1Q9BZJ3 242 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.04□□□□□ -0.16
VCX3A-202ENST00000398729 PCDHGA5Q9Y5G8 931 aa14.04□□□□□ -0.16
VCX3A-202ENST00000398729 CACNA1EQ15878 2313 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 M0QYV0 167 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 DCLK1O15075 740 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 TRIM24O15164 1050 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 ADAM23O75077 832 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 LCP1P13796 627 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 BRD2P25440 801 aaKnown RBP14.03□□□□□ -0.16
VCX3A-202ENST00000398729 GBP1P32455 592 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms