RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 LRRC34Q8IZ02 419 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CRYBG1Q9Y4K1 1723 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PDZK1P1A8MUH7 402 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 HOXA2O43364 376 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 ALOX15P16050 662 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 ABCG1P45844 678 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PSEN2P49810 448 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 TUBP50607 506 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 STARD3Q14849 445 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 TPGS1Q6ZTW0 290 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 B3GALNT2Q8NCR0 500 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 LPCAT1Q8NF37 534 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.88□□□□□ -0.511e-7■■■■■ 78
PCDHGA8-201ENST00000398604 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 C17orf80Q9BSJ5 609 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 FOXP3Q9BZS1 431 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CDC42EP4Q9H3Q1 356 aaKnown RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 RNF112Q9ULX5 631 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CDY1Q9Y6F8 540 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 LGALS2P05162 132 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 GLI1P08151 1106 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SLC16A1P53985 500 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 KCNK10P57789 538 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ILKAPQ9H0C8 392 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ATP13A1Q9HD20 1204 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SHOC2Q9UQ13 582 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 VPS26AO75436 327 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 GUCA1CO95843 209 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 GPC1P35052 558 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SERPINB5P36952 375 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 INPP5AQ14642 412 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 VSIG10LQ86VR7 867 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 OOSP2Q86WS3 158 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 HEY2Q9UBP5 337 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 F8W810 466 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 CCDC130P13994 396 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SERPINB4P48594 390 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PRIM2P49643 509 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 CORO7P57737 925 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 AGAP9Q5VTM2 703 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 RSPH1Q8WYR4 309 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 RERGLQ9H628 205 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 CYP3A43Q9HB55 503 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 VANGL2Q9ULK5 521 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 AAR2Q9Y312 384 aaKnown RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 E5RJQ4 531 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PSTPIP1O43586 416 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SYNCRIPO60506 623 aaKnown RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 RAMP2O60895 175 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PYGMP11217 842 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SSTR1P30872 391 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 FDFT1P37268 417 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 NUDT2P50583 147 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 DLG4P78352 724 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 MPP3Q13368 585 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 PDK2Q15119 407 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 RNF168Q8IYW5 571 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 TRPM4Q8TD43 1214 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ZFYVE19Q96K21 471 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SENP8Q96LD8 212 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ROPN1BQ9BZX4 212 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 ROPN1Q9HAT0 212 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
PCDHGA8-201ENST00000398604 F8VP50 259 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 RNF225M0QZC1 329 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 PLA2G6O60733 806 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 EIF4BP23588 611 aaKnown RBP11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 TARSP26639 723 aaKnown RBP11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 MLH1P40692 756 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 TBX4P57082 545 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms