RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BMPR2Q13873 1038 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 SYTL3Q4VX76 610 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 AARS2Q5JTZ9 985 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 SZRD1Q7Z422 152 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 FAR2Q96K12 515 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 TSC22D3Q99576 134 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CRLS1Q9UJA2 301 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 GP5P40197 560 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 MARCKSL1P49006 195 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 GTF2H3Q13889 308 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 SPDYAQ5MJ70 313 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 UGT3A1Q6NUS8 523 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CHST12Q9NRB3 414 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 TBC1D13Q9NVG8 400 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 TRMT6Q9UJA5 497 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CCDC130P13994 396 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 DPYSL3Q14195 570 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 TTLL9Q3SXZ7 439 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 MOB2Q70IA6 237 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ATXN2LQ8WWM7 1075 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SERPINB11Q96P15 392 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 TLR8Q9NR97 1041 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 RNF103O00237 685 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 FSCN2O14926 492 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SUPT7LO94864 414 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ASMTLO95671 621 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SYF2O95926 243 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 URODP06132 367 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 CKMP06732 381 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 KRT16P08779 473 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 CPA3P15088 417 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SCTRP47872 440 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 RENBPP51606 427 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 POLD3Q15054 466 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 TREML2Q5T2D2 321 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 POLNQ7Z5Q5 900 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 CELF6Q96J87 481 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 KREMEN1Q96MU8 473 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 VAT1Q99536 393 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 NT5MQ9NPB1 228 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SPDYE5A6NIY4 337 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 KCNK1O00180 336 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 SRP72O76094 671 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 MBL2P11226 248 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 PTPN1P18031 435 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 RBL1P28749 1068 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 STX5Q13190 355 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 TMEM259Q4ZIN3 620 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 NKX2-3Q8TAU0 364 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 WNT8BQ93098 351 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 MBOAT7Q96N66 472 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 PDGFCQ9NRA1 345 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ARHGAP26Q9UNA1 814 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 RUVBL2Q9Y230 463 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 NOL4O94818 638 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 DDX5P17844 614 aaKnown RBP14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 PTPN7P35236 360 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 MTA1Q13330 715 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 ARHGAP15Q53QZ3 475 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 CYB5D1Q6P9G0 228 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 GPR142Q7Z601 462 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 RAB42Q8N4Z0 105 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 GID8Q9NWU2 228 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 UBP1Q9NZI7 540 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 PKD2L2Q9NZM6 624 aa14.64□□□□□ -0.07
PCDHGA11-201ENST00000398587 VIRMAQ69YN4 1812 aaKnown RBP14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 VPS26AO75436 327 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 SMIM10L2AP0DMW4 78 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 SMIM10L2BP0DMW5 78 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 TBX4P57082 545 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 CNGA3Q16281 694 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 C15orf59Q2T9L4 293 aaPredicted RBP14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 SEMA4DQ92854 862 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 ARHGAP28Q9P2N2 729 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 B4GALT5O43286 388 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 RHOCP08134 193 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 NQO1P15559 274 aaKnown RBP14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 DNAJB2P25686 324 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 MAP2K5Q13163 448 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 HSDL1Q3SXM5 330 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 DUPD1Q68J44 220 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 BBS12Q6ZW61 710 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 CDK5RAP1Q96SZ6 601 aaKnown RBP14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 SNX5Q9Y5X3 404 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 LIASO43766 372 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 LCA5LO95447 670 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 RBP1P09455 135 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 NPY2RP49146 381 aa14.63□□□□□ -0.07
PCDHGA11-201ENST00000398587 FKBP1BP68106 108 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms