RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SCD5Q86SK9 330 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CNGA4Q8IV77 575 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 DRC7Q8IY82 874 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 IPO4Q8TEX9 1081 aaKnown RBP26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CLEC4CQ8WTT0 213 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 IER2Q9BTL4 223 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 KIF9Q9HAQ2 790 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 NMUR1Q9HB89 426 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CYLDQ9NQC7 956 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 TLR8Q9NR97 1041 aaKnown RBP26.64■■□□□ 1.86
U2AF1-203ENST00000398137 ABHD10Q9NUJ1 306 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 FBXO21O94952 628 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 ERBB2P04626 1255 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 SERPING1P05155 500 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 PLEKP08567 350 aaPredicted RBP26.63■■□□□ 1.85
U2AF1-203ENST00000398137 ZDHHC11BP0C7U3 371 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 TNFAIP3P21580 790 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 HNRNPH3P31942 346 aaKnown RBP26.63■■□□□ 1.85
U2AF1-203ENST00000398137 DAOAP59103 153 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 RUNX3Q13761 415 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 C1orf228Q6PIY5 440 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 TMEM110Q86TL2 294 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 SCUBE3Q8IX30 993 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 ARL14EPQ8N8R7 260 aaPredicted RBP26.63■■□□□ 1.85
U2AF1-203ENST00000398137 THG1LQ9NWX6 298 aaKnown RBP26.63■■□□□ 1.85
U2AF1-203ENST00000398137 OSER1Q9NX31 292 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 NAGPAQ9UK23 515 aa26.63■■□□□ 1.85
U2AF1-203ENST00000398137 PAPSS1O43252 624 aaPredicted RBP26.62■■□□□ 1.85
U2AF1-203ENST00000398137 YWHAGP61981 247 aaKnown RBP eCLIP26.62■■□□□ 1.85
U2AF1-203ENST00000398137 USP4Q13107 963 aa26.62■■□□□ 1.85
U2AF1-203ENST00000398137 ARID5BQ14865 1188 aa26.62■■□□□ 1.85
U2AF1-203ENST00000398137 SCML4Q8N228 414 aa26.62■■□□□ 1.85
U2AF1-203ENST00000398137 SLC30A5Q8TAD4 765 aa26.62■■□□□ 1.85
U2AF1-203ENST00000398137 BZW2Q9Y6E2 419 aaKnown RBP26.62■■□□□ 1.85
U2AF1-203ENST00000398137 YJEFN3A6XGL0 299 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 E7ENQ6 273 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 C2CD6Q53TS8 623 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 NAIF1Q69YI7 327 aaPredicted RBP26.61■■□□□ 1.85
U2AF1-203ENST00000398137 ERICH1Q86X53 443 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 ARHGAP18Q8N392 663 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 DCLK2Q8N568 766 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 SPC24Q8NBT2 197 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 MSANTD4Q8NCY6 345 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 CCSER2Q9H7U1 834 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 ZNHIT6Q9NWK9 470 aaKnown RBP26.61■■□□□ 1.85
U2AF1-203ENST00000398137 ARHGAP20Q9P2F6 1191 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 DMXL1Q9Y485 3027 aa26.61■■□□□ 1.85
U2AF1-203ENST00000398137 TRAV19A0A0A6YYK7 116 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 DDX3XO00571 662 aaKnown RBP eCLIP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 OAS1P00973 400 aaKnown RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 UNGP13051 313 aaPredicted RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 NSFP46459 744 aaKnown RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 CCR3P51677 355 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 CENPCQ03188 943 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 DMWDQ09019 674 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 MTF1Q14872 753 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 TSR1Q2NL82 804 aaKnown RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 SNX30Q5VWJ9 437 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 PKN3Q6P5Z2 889 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 WDR59Q6PJI9 974 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 MMS22LQ6ZRQ5 1243 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 FAM183BPQ6ZVS7 135 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 SPEM1Q8N4L4 309 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 TC2NQ8N9U0 490 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 IRGQQ8WZA9 623 aa26.6■■□□□ 1.85
U2AF1-203ENST00000398137 PIWIL1Q96J94 861 aaKnown RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 FBRSL1Q9HCM7 1045 aaKnown RBP26.6■■□□□ 1.85
U2AF1-203ENST00000398137 K7ESF4 209 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 TLR5O60602 858 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 CKMP06732 381 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 RARGP13631 454 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 PSEN1P49768 467 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 SNX16P57768 344 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 LRRC32Q14392 662 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 TMEM196Q5HYL7 178 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 DGKKQ5KSL6 1271 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 HECTD3Q5T447 861 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 OR6B2Q6IFH4 312 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 FSTL4Q6MZW2 842 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.59■■□□□ 1.85
U2AF1-203ENST00000398137 ATRIPQ8WXE1 791 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 C11orf70Q9BRQ4 267 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.59■■□□□ 1.85
U2AF1-203ENST00000398137 EPC1Q9H2F5 836 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.59■■□□□ 1.85
U2AF1-203ENST00000398137 TAS2R14Q9NYV8 317 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 SPTBN4Q9H254 2564 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 ATG2BQ96BY7 2078 aa26.59■■□□□ 1.85
U2AF1-203ENST00000398137 SART1O43290 800 aaKnown RBP26.58■■□□□ 1.85
U2AF1-203ENST00000398137 COCHO43405 550 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 TCF3P15923 654 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 EIF4A3P38919 411 aaKnown RBP26.58■■□□□ 1.85
U2AF1-203ENST00000398137 CXCL12P48061 93 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 TUBP50607 506 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 VPS36Q86VN1 386 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 SH3RF2Q8TEC5 729 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 OSCP1Q8WVF1 389 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 EDEM1Q92611 657 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 FAM149B1Q96BN6 582 aa26.58■■□□□ 1.85
U2AF1-203ENST00000398137 C18orf8Q96DM3 657 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms