RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC18A2Q05940 514 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 PDK3Q15120 406 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 PPM1NQ8N819 430 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 FBXO27Q8NI29 283 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 FAM172AQ8WUF8 416 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 SRPK1Q96SB4 655 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 ARHGEF4Q9NR80 690 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 PCDHGC3Q9UN70 934 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 EFR3BQ9Y2G0 817 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 H3BRJ5 948 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 APOC4-APOC2K7ER74 178 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 TGDSO95455 350 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 APOC2P02655 101 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 ENO1P06733 434 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 MIPP30301 263 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 POLR2BP30876 1174 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 MLH1P40692 756 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 PSMD7P51665 324 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 SH2D5Q6ZV89 423 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 TMEM130Q8N3G9 435 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 CPXM1Q96SM3 734 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 SIKE1Q9BRV8 207 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 FRMD8P1Q9BZ68 369 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF395Q9H8N7 513 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 DDX18Q9NVP1 670 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 ITGB1BP2Q9UKP3 347 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 SPATA31C2B4DYI2 1134 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 PGM3O95394 542 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 CPA3P15088 417 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ASPAP45381 313 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 HMGCS2P54868 508 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 OXCT1P55809 520 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 OSTNP61366 133 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ROR1Q01973 937 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ADRM1Q16186 407 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 DUOXA2Q1HG44 320 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 SFT2D3Q587I9 215 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 FAXCQ5TGI0 409 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 C1orf146Q5VVC0 180 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 DHDDSQ86SQ9 333 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ULK2Q8IYT8 1036 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 NUP93Q8N1F7 819 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 KLHL4Q9C0H6 718 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ARHGEF38Q9NXL2 777 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 CNTN3Q9P232 1028 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 MARCOQ9UEW3 520 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF214Q9UL59 606 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 TEX264Q9Y6I9 313 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ERBB2P04626 1255 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 SMIM18P0DKX4 95 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 KITP10721 976 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 OAZ1P54368 228 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 YWHAEP62258 255 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 TAZQ16635 292 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 MMEL1Q495T6 779 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 DNAL1Q4LDG9 190 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 UGT2A3Q6UWM9 527 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 TREML1Q86YW5 311 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 APOBEC3FQ8IUX4 373 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 C17orf50Q8WW18 174 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 FAF2Q96CS3 445 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 SLC13A1Q9BZW2 595 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 FAIMQ9NVQ4 179 aa16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 PPARGC1AQ9UBK2 798 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-201ENST00000397901 CCDC160A6NGH7 325 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 ADCY3O60266 1144 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 FAM189A1O60320 539 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 ATG7O95352 703 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 CDH8P55286 799 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 FSTL1Q12841 308 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 MSLNQ13421 630 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 FNDC8Q8TC99 324 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 TRPM4Q8TD43 1214 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 PLA2G4CQ9UP65 541 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 DMTF1Q9Y222 760 aa16.52■□□□□ 0.24
CHMP1A-201ENST00000397901 CXorf49A8MYA2 514 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 H7C0C1 242 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 I3L4J1 428 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 MAGEB3O15480 346 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 ATP5OP48047 213 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 TMPRSS15P98073 1019 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 BMPR2Q13873 1038 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 RAB6CQ53S08 254 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 SH3PXD2AQ5TCZ1 1133 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 XYLT1Q86Y38 959 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 CEP70Q8NHQ1 597 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 LRRN4Q8WUT4 740 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 ZNF668Q96K58 619 aaPredicted RBP16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 CLPTM1LQ96KA5 538 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 BRD8Q9H0E9 1235 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms