RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PRELID2Q8N945 189 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 KCTD6Q8NC69 237 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 TSC1Q92574 1164 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 HSPH1Q92598 858 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 EMILIN2Q9BXX0 1053 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 FAM204AQ9H8W3 233 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 ENTPD7Q9NQZ7 604 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 DDIT4Q9NX09 232 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 MTMR10Q9NXD2 777 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 FZD10Q9ULW2 581 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 GOLGA6L10A0A0M3HER8 536 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 HIDE1A8MVS5 230 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 PRRG1O14668 218 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 GRM6O15303 877 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 IRAK2O43187 625 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 CD48P09326 243 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 IL4RP24394 825 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 L1CAMP32004 1257 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 DPYSL3Q14195 570 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 ODF2Q5BJF6 829 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 ZFYVE27Q5T4F4 411 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 PDZD8Q8NEN9 1154 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 ADAM32Q8TC27 787 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 FAF2Q96CS3 445 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 AP4E1Q9UPM8 1137 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 V9GYY5 206 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 LAMA3Q16787 3333 aa20.26■□□□□ 0.83
PDLIM2-205ENST00000397761 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 H3BNC9 293 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 GBP1P32455 592 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 ADRA1BP35368 520 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 CDH6P55285 790 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 ADCY2Q08462 1091 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 NME3Q13232 169 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 PLD1Q13393 1074 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 NNTQ13423 1086 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 CA9Q16790 459 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 ZC3H12AQ5D1E8 599 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 PDE12Q6L8Q7 609 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 BBS12Q6ZW61 710 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 CASP10Q92851 521 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 ZNF670Q9BS34 389 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 SLITRK6Q9H5Y7 841 aa20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 OLA1Q9NTK5 396 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDLIM2-205ENST00000397761 I6L893 689 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PHF2O75151 1096 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 TJP3O95049 919 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 KRT10P13645 584 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 BMP8BP34820 402 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 VEPH1Q14D04 833 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 GLE1Q53GS7 698 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 SND1Q7KZF4 910 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 ADAT2Q7Z6V5 191 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 GPR161Q8N6U8 529 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 RNF139Q8WU17 664 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PSMG2Q969U7 264 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 HEMGNQ9BXL5 484 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 LRRC19Q9H756 370 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 RCOR3Q9P2K3 495 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 ASB3Q9Y575 518 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 MYO9BQ13459 2157 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 NOTCH4Q99466 2003 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 RARGP13631 454 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PBX2P40425 430 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 EPHB3P54753 998 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 TWF1Q12792 350 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 SEMA3BQ13214 749 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 PPP2R5DQ14738 602 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 LLGL1Q15334 1064 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 BRMS1LQ5PSV4 323 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 CCDC149Q6ZUS6 474 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 SERPINB11Q96P15 392 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 KRT12Q99456 494 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 DDX47Q9H0S4 455 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 ANKZF1Q9H8Y5 726 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 ANLNQ9NQW6 1124 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 HOMER3Q9NSC5 361 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 ARHGEF38Q9NXL2 777 aa20.24■□□□□ 0.83
PDLIM2-205ENST00000397761 HELZP42694 1942 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 TARSL2A2RTX5 802 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 GLUD1P00367 558 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 KLRC2P26717 231 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 CHRNA3P32297 505 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 PPP3CCP48454 512 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 CLCN4P51793 760 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 KRT81Q14533 505 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 ELF2Q15723 593 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms