RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 BST2Q10589 180 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 XRCC4Q13426 336 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TAF1CQ15572 869 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 RSPH3Q86UC2 560 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC26A11Q86WA9 606 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 UBR7Q8N806 425 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 CFAP61Q8NHU2 1237 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 PTPRN2Q92932 1015 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 GAD1Q99259 594 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TMEM120AQ9BXJ8 343 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 C3orf70A6NLC5 250 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 EDF1O60869 148 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 NCF2P19878 526 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TYK2P29597 1187 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SERPINB4P48594 390 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TKTL1P51854 596 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 BCAT1P54687 386 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 HDAC4P56524 1084 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 PDK2Q15119 407 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 CCL14Q16627 93 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 LACTB2Q53H82 288 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 C9orf57Q5W0N0 161 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 C2orf69Q8N8R5 385 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TFB1MQ8WVM0 346 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 CDKL2Q92772 493 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 MYCBPQ99417 103 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 ABHD16BQ9H3Z7 469 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 ZFATQ9P243 1243 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 POLR2AP24928 1970 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 EEF2KO00418 725 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 AP1G2O75843 785 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 POMCP01189 267 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 PDHA1P08559 390 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 USP17L7P0C7H9 530 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 YWHAZP63104 245 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 ITKQ08881 620 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 EFHC2Q5JST6 749 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TTC39BQ5VTQ0 682 aaPredicted RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 CGB2Q6NT52 195 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SCN4BQ8IWT1 228 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 NIPA2Q8N8Q9 360 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 DFFAO00273 331 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ENTPD5O75356 428 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ERVK-10P10266 1014 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 FGFR1P11362 822 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 YBX3P16989 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 HUNKP57058 714 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 MFSD10Q14728 455 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TAF11Q15544 211 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 DCAF4L1Q3SXM0 396 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 IL31Q6EBC2 164 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TTC7BQ86TV6 843 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TP53INP2Q8IXH6 220 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ATP2A3Q93084 1043 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 MAML3Q96JK9 1138 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ZNF560Q96MR9 790 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CYP4F11Q9HBI6 524 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 RPS6KL1Q9Y6S9 549 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TCRBV5S1A1TA0A578 114 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 SPTLC1O15269 473 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 IGFBP6P24592 240 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 PSMB4P28070 264 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 GRM5P41594 1212 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ENPEPQ07075 957 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 DRICH1Q6PGQ1 229 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 RASSF3Q86WH2 238 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CRLF3Q8IUI8 442 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 SUGP1Q8IWZ8 645 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 PAF1Q8N7H5 531 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 FNIP1Q8TF40 1166 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TMEM40Q8WWA1 233 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ZNF669Q96BR6 464 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 GBA2Q9HCG7 927 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 DDX43Q9NXZ2 648 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 NOP53Q9NZM5 478 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CPSF2Q9P2I0 782 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 DNAJC25-GNG10A0A024R161 153 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 LOC100653049A0A140TA62 436 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 H3BRJ5 948 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 RNF103O00237 685 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 KRT34O76011 436 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 B3GAT3O94766 335 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 GSTA1P08263 222 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CDH5P33151 784 aaPredicted RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 TPI1P60174 286 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 BNIP1Q12981 228 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms