RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 PTPN22Q9Y2R2 807 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 HEMK1Q9Y5R4 338 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 MBD5Q9P267 1494 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SYNJ1O43426 1573 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ABCC2Q92887 1545 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ZNF609O15014 1411 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM25AB3EWG3 89 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM25CB3EWG5 89 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM25GB3EWG6 89 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RGS5O15539 181 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MED26O95402 600 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CSH1P0DML2 217 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CSH2P0DML3 217 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 USF2Q15853 346 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 DCAF4L1Q3SXM0 396 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 KLHL26Q53HC5 615 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TWF2Q6IBS0 349 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 PNMA1Q8ND90 353 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 GOT1L1Q8NHS2 421 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 PHF21AQ96BD5 680 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 BLZF1Q9H2G9 400 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RWDD3Q9Y3V2 267 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ARHGEF40Q8TER5 1519 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MRC2Q9UBG0 1479 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CBFA2T3O75081 653 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 UBOX5O94941 541 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 KITP10721 976 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CENPAP49450 140 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ST3GAL1Q11201 340 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 GALNT13Q8IUC8 556 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RELTQ969Z4 430 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TUBA1CQ9BQE3 449 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ZFYVE1Q9HBF4 777 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PCDH18Q9HCL0 1135 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MYOZ2Q9NPC6 264 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CHST12Q9NRB3 414 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RGS18Q9NS28 235 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ING3Q9NXR8 418 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RNF24Q9Y225 148 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CDH3P22223 829 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CCT3P49368 545 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 PHC1P78364 1004 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TGM3Q08188 693 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SLC12A1Q13621 1099 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SPCS2Q15005 226 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CABP7Q86V35 215 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 C12orf56Q8IXR9 622 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 C4orf19Q8IY42 314 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SLC43A2Q8N370 569 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SLC25A41Q8N5S1 370 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 EXD1Q8NHP7 514 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SPATA20Q8TB22 786 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 GATAD2BQ8WXI9 593 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 P2RX5Q93086 422 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 OTULINQ96BN8 352 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CRELD1Q96HD1 420 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ZNF514Q96K75 400 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 BTBD6Q96KE9 485 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MYD88Q99836 296 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TSEN34Q9BSV6 310 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 OLA1Q9NTK5 396 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 FRMPD2Q68DX3 1309 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 SH3D21A4FU49 640 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ECDO95905 644 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM153BP0C7A2 387 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MARK3P27448 753 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ZNF268Q14587 947 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 PKN1Q16512 942 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM153CQ494X1 144 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 ANKDD1AQ495B1 522 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TIGD3Q6B0B8 471 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PRR5LQ6MZQ0 368 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TYW1BQ6NUM6 668 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 C2CD5Q86YS7 1000 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PIK3C3Q8NEB9 887 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 IRGQQ8WZA9 623 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PMM1Q92871 262 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 MCRS1Q96EZ8 462 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PGM2Q96G03 612 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 PPP1R16AQ96I34 528 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 LIN28AQ9H9Z2 209 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 KBTBD4Q9NVX7 518 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 NYAP2Q9P242 653 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM153AQ9UHL3 310 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 FAM32AQ9Y421 112 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 V9GY48 417 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 CEP170BQ9Y4F5 1589 aaPredicted RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 SF3B1O75533 1304 aaKnown RBP eCLIP2.61□□□□□ -1.99
NEB-203ENST00000397345 REREQ9P2R6 1566 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 LOC100653049A0A140TA62 436 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 DFNA5O60443 496 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 KRT34O76011 436 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 RPL17P18621 184 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 CCND2P30279 289 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 CPA2P48052 419 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 TTLL4Q14679 1199 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 SMAD1Q15797 465 aaKnown RBP2.61□□□□□ -1.99
NEB-203ENST00000397345 CCDC157Q569K6 752 aa2.61□□□□□ -1.99
NEB-203ENST00000397345 NELFCDQ8IXH7 590 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms