RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 EIF4EBP2Q13542 120 aaPredicted RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 MTF1Q14872 753 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 TAC4Q86UU9 113 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 MIB1Q86YT6 1006 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 RIN3Q8TB24 985 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 NT5C3BQ969T7 300 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 PGAP3Q96FM1 320 aaPredicted RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 NPY6RQ99463 290 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 EIF3CQ99613 913 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 MRPL47Q9HD33 250 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 LUC7LQ9NQ29 371 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 SFMBT1Q9UHJ3 866 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 LSM7Q9UK45 103 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 TLR6Q9Y2C9 796 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 SOWAHDA6NJG2 315 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 ZNF263O14978 683 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 CHADO15335 359 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 STC2O76061 302 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 NDUFA10O95299 355 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 CYP1A2P05177 515 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 TMEM253P0C7T8 217 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 ABCB4P21439 1286 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 GBP1P32455 592 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 PTPN9P43378 593 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 RNASE9P60153 205 aaKnown RBP17.12■□□□□ 0.33
AP1S3-202ENST00000396653 GPC5P78333 572 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 MAMLD1Q13495 774 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 SLC25A52Q3SY17 297 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 HTR3DQ70Z44 454 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 BNIPLQ7Z465 357 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 DNAAF5Q86Y56 855 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 SLC44A3Q8N4M1 653 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 JOSD2Q8TAC2 188 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 FNIP1Q8TF40 1166 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-202ENST00000396653 LRRC3BQ96PB8 259 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 MCEEQ96PE7 176 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-202ENST00000396653 PLA2G2FQ9BZM2 168 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 DCLK3Q9C098 648 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 THAP2Q9H0W7 228 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 THG1LQ9NWX6 298 aaKnown RBP17.12■□□□□ 0.33
AP1S3-202ENST00000396653 CFAP97Q9P2B7 532 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 SORCS3Q9UPU3 1222 aa17.12■□□□□ 0.33
AP1S3-202ENST00000396653 EPN1Q9Y6I3 576 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-202ENST00000396653 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 ATMINO43313 823 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 MSI1O43347 362 aaKnown RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 IPO7O95373 1038 aaKnown RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 LATS1O95835 1130 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 ASGR2P07307 311 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 GPD1P21695 349 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 SDC4P31431 198 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 RFC1P35251 1148 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 SULT1E1P49888 294 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 TBX4P57082 545 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 MTA1Q13330 715 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 TDGQ13569 410 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 SPA17Q15506 151 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 DCUN1D2Q6PH85 259 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 RAD9BQ6WBX8 426 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 PHLDB2Q86SQ0 1253 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 EMC1Q8N766 993 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 OTUB2Q96DC9 234 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 SLC39A13Q96H72 371 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 RPP25Q9BUL9 199 aaKnown RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 TRMT61BQ9BVS5 477 aaKnown RBP17.11■□□□□ 0.33
AP1S3-202ENST00000396653 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 ZNF510Q9Y2H8 683 aa17.11■□□□□ 0.33
AP1S3-202ENST00000396653 NRDCO43847 1150 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 GREM1O60565 184 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 ENDOD1O94919 500 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 GJB6O95452 261 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 F9P00740 461 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 IRF1P10914 325 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 SRFP11831 508 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 DESP17661 470 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
AP1S3-202ENST00000396653 RPL7AP62424 266 aaKnown RBP17.1■□□□□ 0.33
AP1S3-202ENST00000396653 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
AP1S3-202ENST00000396653 PDGFRLQ15198 375 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
AP1S3-202ENST00000396653 Q6ZNB5 142 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 STRADAQ7RTN6 431 aa17.1■□□□□ 0.33
AP1S3-202ENST00000396653 LRRC8AQ8IWT6 810 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms