RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 KAZNQ674X7 775 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 DENND5BQ6ZUT9 1274 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 PCDH19Q8TAB3 1148 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 AUTS2Q8WXX7 1259 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 MAFFQ9ULX9 164 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 SNX30Q5VWJ9 437 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 JAMLQ86YT9 394 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 PYROXD2Q8N2H3 581 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 ARHGEF38Q9NXL2 777 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 GMIPQ9P107 970 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 ANAPC1Q9H1A4 1944 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 C5orf67F2Z3F1 127 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CAPN9O14815 690 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 F9P00740 461 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 HMGA1P17096 107 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 ADRA1BP35368 520 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CETN2P41208 172 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 KCNJ1P48048 391 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 KIAA1841Q6NSI8 718 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 PLD5Q8N7P1 536 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CASP10Q92851 521 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CLIC5Q9NZA1 410 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CST8O60676 142 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 URODP06132 367 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 YWHAQP27348 245 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 BMPR1AP36894 532 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 TUFMP49411 452 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 NME3Q13232 169 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 BEND6Q5SZJ8 279 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 AENQ8WTP8 325 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 TRIM51Q9BSJ1 452 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 FRMD8P1Q9BZ68 369 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 EPB41L5Q9HCM4 733 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 NEU3Q9UQ49 428 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 DRG1Q9Y295 367 aaKnown RBP13.22□□□□□ -0.29
TRIM39-204ENST00000396548 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
TRIM39-204ENST00000396548 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.29
TRIM39-204ENST00000396548 LINC01553A4QN01 128 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 TP73O15350 636 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 TEX28O15482 410 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 IRAK2O43187 625 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 PECAM1P16284 738 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-204ENST00000396548 DNAJB1P25685 340 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
TRIM39-204ENST00000396548 GUCY2DQ02846 1103 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 ARHGAP18Q8N392 663 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 MYRFLQ96LU7 910 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 CSPG4P5Q96PW8 444 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 ERP44Q9BS26 406 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 PLEKHA4Q9H4M7 779 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
TRIM39-204ENST00000396548 KCNU1A8MYU2 1149 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 TLL1O43897 1013 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 APOC2P02655 101 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 CARSP49589 748 aaKnown RBP13.21□□□□□ -0.3
TRIM39-204ENST00000396548 KRT17Q04695 432 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 BTBD8Q5XKL5 378 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 LILRA6Q6PI73 481 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 SLC39A13Q96H72 371 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 CALN1Q9BXU9 219 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.3
TRIM39-204ENST00000396548 DDIT4Q9NX09 232 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 SAE1Q9UBE0 346 aaPredicted RBP13.21□□□□□ -0.3
TRIM39-204ENST00000396548 DENND4CQ5VZ89 1909 aa13.21□□□□□ -0.3
TRIM39-204ENST00000396548 FAM72CH0Y354 149 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 MCM3P25205 808 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 IVDP26440 423 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 CREMQ03060 361 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 TAF10Q12962 218 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 SNX1Q13596 522 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 DPYSQ14117 519 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FAM72AQ5TYM5 149 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FAM72DQ6L9T8 149 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FAM72BQ86X60 149 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms