RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ACBD6Q9BR61 282 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 TRABDQ9H4I3 376 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 CRTAC1Q9NQ79 661 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 FZD10Q9ULW2 581 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 SCN10AQ9Y5Y9 1956 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 C5orf60A6NFR6 353 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 APRTP07741 180 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 CORO7P57737 925 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 ADCY1Q08828 1119 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 TRIM32Q13049 653 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 KCNT2Q6UVM3 1135 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 MRRFQ96E11 262 aaKnown RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 PCED1BQ96HM7 432 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 KCTD15Q96SI1 283 aaPredicted RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 ZIC5Q96T25 663 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 ATXN2Q99700 1313 aaKnown RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
SNX6-202ENST00000396526 IFT88Q13099 833 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 PDK1Q15118 436 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 FNBP1LQ5T0N5 605 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 LGSNQ5TDP6 509 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 GLB1LQ6UWU2 654 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 CCDC185Q8N715 623 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 SLC7A14Q8TBB6 771 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 LRRC39Q96DD0 335 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
SNX6-202ENST00000396526 PPP1R12AO14974 1030 aaPredicted RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 TMEM63AO94886 807 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 ELNP15502 786 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 AMPD1P23109 780 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 SSTR1P30872 391 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 ZNF135P52742 658 aaPredicted RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 ATXN1P54253 815 aaKnown RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 TIGD5Q53EQ6 642 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 PAQR9Q6ZVX9 377 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 YTHDF3Q7Z739 585 aaKnown RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 MAML1Q92585 1016 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 ETNK2Q9NVF9 386 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 DDX20Q9UHI6 824 aaKnown RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 GCATO75600 419 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 NCAM1P13591 858 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 DRD4P21917 467 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 DAOAP59103 153 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 TRABD2AQ86V40 505 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 FBF1Q8TES7 1133 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 SLC2A13Q96QE2 648 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 CHMP2BQ9UQN3 213 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 IQANK1A0A1B0GTG1 560 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 CREB3O43889 395 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 LTFP02788 710 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 INHBAP08476 426 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 KCNJ11Q14654 390 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 LPIN1Q14693 890 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 LRRC14Q15048 493 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 DCLRE1AQ6PJP8 1040 aa16.72■□□□□ 0.27
SNX6-202ENST00000396526 ALKBH8Q96BT7 664 aaKnown RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 PAIP2Q9BPZ3 127 aaKnown RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 ZMYND8Q9ULU4 1186 aaPredicted RBP16.72■□□□□ 0.27
SNX6-202ENST00000396526 EEF2KO00418 725 aaKnown RBP16.71■□□□□ 0.27
SNX6-202ENST00000396526 GOT1P17174 413 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 FDFT1P37268 417 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 ELK3P41970 407 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 NDUFV1P49821 464 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 GBE1Q04446 702 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 CCDC142Q17RM4 750 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 CYP4X1Q8N118 509 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 MCUQ8NE86 351 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 PLCD4Q9BRC7 762 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 XAB2Q9HCS7 855 aaKnown RBP16.71■□□□□ 0.27
SNX6-202ENST00000396526 SRRDQ9UH36 339 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 BEST1O76090 585 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 MAP3K6O95382 1288 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 SPARCL1Q14515 664 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 OVOS1Q6IE37 1185 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 VSTM1Q6UX27 236 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 CCDC110Q8TBZ0 833 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 URGCPQ8TCY9 931 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 HTR3CQ8WXA8 447 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 IRGQQ8WZA9 623 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 NDRG1Q92597 394 aaKnown RBP16.71■□□□□ 0.27
SNX6-202ENST00000396526 NT5C3BQ969T7 300 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 ZNF317Q96PQ6 595 aaPredicted RBP16.71■□□□□ 0.27
SNX6-202ENST00000396526 QKIQ96PU8 341 aaKnown RBP eCLIP16.71■□□□□ 0.272e-11■■■■■ 27.9
SNX6-202ENST00000396526 RABGEF1Q9UJ41 708 aa16.71■□□□□ 0.27
SNX6-202ENST00000396526 MOXD2PA6NHM9 499 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 CPP00450 1065 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 GSTA2P09210 222 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 ACLYP53396 1101 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 CDK16Q00536 496 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 DSC3Q14574 896 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 FAM26DQ5JW98 314 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 LRRC34Q8IZ02 419 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 CCNYQ8ND76 341 aa16.71■□□□□ 0.26
SNX6-202ENST00000396526 RNF34Q969K3 372 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms