RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NDRG1Q92597 394 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 ADAMTS10Q9H324 1103 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 C12orf65Q9H3J6 166 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 NOD2Q9HC29 1040 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 NCAM1P13591 858 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 RGS2P41220 211 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 TPI1P60174 286 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 WSCD1Q658N2 575 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 FITM2Q8N6M3 262 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 STAMBPL1Q96FJ0 436 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 APOPT1Q96IL0 206 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 TSNARE1Q96NA8 513 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 AGAP3Q96P47 875 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 TACO1Q9BSH4 297 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC17A7Q9P2U7 560 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 AP1G2O75843 785 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 APOEP02649 317 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 PTPN9P43378 593 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 NLRP9Q7RTR0 991 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 CCDC185Q8N715 623 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 GSDMBQ8TAX9 411 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 RNF39Q9H2S5 420 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 CNTN3Q9P232 1028 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 INPP5FQ9Y2H2 1132 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 KITP10721 976 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 PTPN1P18031 435 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 FDFT1P37268 417 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 GARSP41250 739 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 COLGALT1Q8NBJ5 622 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 PIH1D1Q9NWS0 290 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 HAO1Q9UJM8 370 aa11.96□□□□□ -0.5
PDXDC1-202ENST00000396410 KAT6AQ92794 2004 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 EDF1O60869 148 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 RASSF9O75901 435 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 HAUS5O94927 633 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 PFKMP08237 780 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 MATKP42679 507 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 KCNJ2P63252 427 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 FSCN1Q16658 493 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 ZNF618Q5T7W0 954 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 SREK1Q8WXA9 508 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.53e-8■■■■□ 24.6
PDXDC1-202ENST00000396410 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 KCTD15Q96SI1 283 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 SLC12A4Q9UP95 1085 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 GPR32O75388 356 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 ATP6V1G2O95670 118 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 NPR3P17342 541 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 BGNP21810 368 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 NCALDP61601 193 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 FKBP1BP68106 108 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 CCDC6Q16204 474 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 ECHDC2Q86YB7 292 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 PQLC3Q8N755 202 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 ADAM32Q8TC27 787 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 FETUBQ9UGM5 382 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 XPO1O14980 1071 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 TOMM70O94826 608 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 TFE3P19532 575 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 GCAP28676 217 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 KCNJ11Q14654 390 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 TRNP1Q6NT89 227 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 ZNF354CQ86Y25 554 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 PYROXD2Q8N2H3 581 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 SLC44A1Q8WWI5 657 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 LGMNQ99538 433 aa11.95□□□□□ -0.5
PDXDC1-202ENST00000396410 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 FAM155BO75949 473 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 F2P00734 622 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 THP07101 528 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ALADP13716 330 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 L1CAMP32004 1257 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SERPINB9P50453 376 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 RWDD4Q6NW29 188 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 CRLF3Q8IUI8 442 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 IGDCC3Q8IVU1 814 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 DCAKDQ8WVC6 231 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ZFP42Q96MM3 310 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 DUSP16Q9BY84 665 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 VPS11Q9H270 941 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TRDMT1O14717 391 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 NOS2P35228 1153 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 TAF1BQ53T94 588 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ANKRD20A2Q5SQ80 823 aa11.94□□□□□ -0.5
PDXDC1-202ENST00000396410 ANKRD20A1Q5TYW2 823 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms