RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 RPF1Q9H9Y2 349 aaKnown RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 GBA2Q9HCG7 927 aaPredicted RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 INPP5FQ9Y2H2 1132 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NME7Q9Y5B8 376 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SNX9Q9Y5X1 595 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NEMP1O14524 444 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TBX10O75333 385 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 MICAL2O94851 1124 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NPTXRO95502 500 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 CCNB1P14635 433 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 ETS2P15036 469 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 GBE1Q04446 702 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 HIC1Q14526 733 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 CST9Q5W186 159 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 ANO7Q6IWH7 933 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NME8Q8N427 588 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 GRAMD1AQ96CP6 724 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 C16orf70Q9BSU1 422 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 MAF1Q9H063 256 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PDZD7Q9H5P4 517 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TAS2R1Q9NYW7 299 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 CACNG4Q9UBN1 327 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 BTBD19C9JJ37 291 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PPEF2O14830 753 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 DGKIO75912 1065 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PTPN4P29074 926 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 EFNA5P52803 228 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 RIPK1Q13546 671 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TCHHL1Q5QJ38 904 aaPredicted RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 TREML1Q86YW5 311 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PYROXD2Q8N2H3 581 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 AGGF1Q8N302 714 aaeCLIP9.63□□□□□ -0.87
NDE1-201ENST00000396354 ADAM32Q8TC27 787 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 DEPDC1BQ8WUY9 529 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 DCAKDQ8WVC6 231 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 BRI3BPQ8WY22 251 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 ELOVL4Q9GZR5 314 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 VPS11Q9H270 941 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SHOC2Q9UQ13 582 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 CITO14578 2027 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 GOLGA8QA0A0J9YX86 632 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 IQANK1A0A1B0GTG1 560 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 GOLGA8OA6NCC3 632 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 GOLGA8NF8WBI6 632 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 KRT7P08729 469 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CSH1P0DML2 217 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CSH2P0DML3 217 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 ARF4P18085 180 aaPredicted RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 NDST1P52848 882 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 MXD4Q14582 209 aaPredicted RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 TRNP1Q6NT89 227 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CTU1Q7Z7A3 348 aaKnown RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 FAM131BQ86XD5 332 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 SLC35B2Q8TB61 432 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 FAM172AQ8WUF8 416 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 FAM167AQ96KS9 214 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 C20orf27Q9GZN8 174 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 UBP1Q9NZI7 540 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 ZFATQ9P243 1243 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CPSF2Q9P2I0 782 aaKnown RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 PRR5-ARHGAP8B1AHC4 643 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CREB3O43889 395 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 CCDC22O60826 627 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 ZWINTO95229 277 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 ARHGAP8P85298 464 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 PDE1BQ01064 536 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 SLC25A11Q02978 314 aaKnown RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 KLHL38Q2WGJ6 581 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 SLC10A6Q3KNW5 377 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 C4orf50Q6ZRC1 276 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 RGS9BPQ6ZS82 235 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 FAM183BPQ6ZVS7 135 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 NAT8LQ8N9F0 302 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 GSTCDQ8NEC7 633 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 SLC26A7Q8TE54 656 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 NRG4Q8WWG1 115 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 AZIN2Q96A70 460 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 OXNAD1Q96HP4 312 aaPredicted RBP9.62□□□□□ -0.87
NDE1-201ENST00000396354 NSL1Q96IY1 281 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 LGMNQ99538 433 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 PTPN18Q99952 460 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 ACSS3Q9H6R3 686 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 EURLQ9NYK6 297 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 TSPAN16Q9UKR8 245 aa9.62□□□□□ -0.87
NDE1-201ENST00000396354 PDHXO00330 501 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 DPYSL4O14531 572 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 KIF3CO14782 793 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 GSC2O15499 205 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 ITGAVP06756 1048 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 SERPINB6P35237 376 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 YWHAEP62258 255 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms