RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 ENDOD1O94919 500 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 TRUB2O95900 331 aaKnown RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 FOSL2P15408 326 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 H2AFXP16104 143 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 MTHFRP42898 656 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 ZNF252P-AS1Q0IIN9 211 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 CDO1Q16878 200 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 ZNF569Q5MCW4 686 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 BRMS1LQ5PSV4 323 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 ACBD5Q5T8D3 534 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 TMC5Q6UXY8 1006 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 POLNQ7Z5Q5 900 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.762e-7■■□□□ 13.8
DDX39B-202ENST00000396172 MICALL1Q8N3F8 863 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 UBL4BQ8N7F7 174 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 CENPIQ92674 756 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 NECTIN4Q96NY8 510 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 TBCBQ99426 244 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 DDIT4Q9NX09 232 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 MARCH2Q9P0N8 246 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 DNMT3BQ9UBC3 853 aaKnown RBP10.29□□□□□ -0.76
DDX39B-202ENST00000396172 RASAL2Q9UJF2 1139 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 TLR6Q9Y2C9 796 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
DDX39B-202ENST00000396172 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 IGLV3-25P01717 112 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 APOEP02649 317 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 FYNP06241 537 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 KRT7P08729 469 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SSR1P43307 286 aaKnown RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 GNG11P61952 73 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 COG7P83436 770 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ATP11AP98196 1134 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 OGDHQ02218 1023 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 LRRC38Q5VT99 294 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SYPL2Q5VXT5 272 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TRNP1Q6NT89 227 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 GAREM2Q75VX8 874 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 GRASPQ7Z6J2 395 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TAC4Q86UU9 113 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 PSTKQ8IV42 348 aaKnown RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 PLD4Q96BZ4 506 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 BTBD6Q96KE9 485 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ADAM7Q9H2U9 754 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TRPC7Q9HCX4 862 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 HCFC1R1Q9NWW0 138 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 MRPS23Q9Y3D9 190 aaKnown RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 FANCGO15287 622 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 LINC01565O15544 149 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 LRCH4O75427 683 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 OLFM2O95897 454 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 CKMP06732 381 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 COMTP21964 271 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 CCR1P32246 355 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ETF1P62495 437 aaKnown RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 RING1Q06587 406 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 EFEMP1Q12805 493 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 PPP2R5DQ14738 602 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 C15orf59Q2T9L4 293 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ODF2Q5BJF6 829 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 PRSS36Q5K4E3 855 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 ATAT1Q5SQI0 421 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 NUGGCQ68CJ6 796 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 CC2D1AQ6P1N0 951 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SYT10Q6XYQ8 523 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 BNIPLQ7Z465 357 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TMEM150AQ86TG1 271 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SHKBP1Q8TBC3 707 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 RNF34Q969K3 372 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 CDX2Q99626 313 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TASP1Q9H6P5 420 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 OSER1Q9NX31 292 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 DDX56Q9NY93 547 aaKnown RBP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDX39B-202ENST00000396172 SLC12A6Q9UHW9 1150 aa10.28□□□□□ -0.76
DDX39B-202ENST00000396172 TBX10O75333 385 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
DDX39B-202ENST00000396172 FSHRP23945 695 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 CTNNA2P26232 953 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 CTNNA1P35221 906 aaKnown RBP10.27□□□□□ -0.77
DDX39B-202ENST00000396172 AVPR1AP37288 418 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 TBX4P57082 545 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 CYP4F8P98187 520 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 NME3Q13232 169 aa10.27□□□□□ -0.77
DDX39B-202ENST00000396172 ERCC6LQ2NKX8 1250 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms