RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KIAA1958Q8N8K9 716 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 NUDCD1Q96RS6 583 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TRIM51Q9BSJ1 452 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 DHRS4Q9BTZ2 278 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 CCDC28BQ9BUN5 200 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 DCLK3Q9C098 648 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 AP5M1Q9H0R1 490 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 MMADHCQ9H3L0 296 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 DCLRE1BQ9H816 532 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 NMRK1Q9NWW6 199 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 FBXO9Q9UK97 447 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 MTUS1Q9ULD2 1270 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 ZNF510Q9Y2H8 683 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 DENND4CQ5VZ89 1909 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 hCG_1818297A0A087WSY0 165 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DYTNA2CJ06 578 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SMIM23A6NLE4 172 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GPR182O15218 404 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GPR37L1O60883 481 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 LRRN2O75325 713 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 FBXO21O94952 628 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 RARGP13631 454 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TNNI1P19237 187 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TGM2P21980 687 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GSTT1P30711 240 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MAGEA3P43357 314 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CLCN3P51790 818 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 YARSP54577 528 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 MRPL58Q14197 206 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 MTFR1Q15390 333 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 UBAP2Q5T6F2 1119 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 RSPH3Q86UC2 560 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ARHGAP18Q8N392 663 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TTC30BQ8N4P2 665 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ARFGAP1Q8N6T3 406 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SLAIN1Q8ND83 568 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PRR7Q8TB68 274 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 TRIB2Q92519 343 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ZNF653Q96CK0 615 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GRAMD1AQ96CP6 724 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SLC7A6OSQ96CW6 309 aaPredicted RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 HPDLQ96IR7 371 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 C19orf43Q9BQ61 176 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ZNF670Q9BS34 389 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS41-203ENST00000395969 PDP2Q9P2J9 529 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 STK39Q9UEW8 545 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SRRDQ9UH36 339 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SFMBT1Q9UHJ3 866 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 RASAL2Q9UJF2 1139 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 NME7Q9Y5B8 376 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 VWA8A3KMH1 1905 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CLUHO75153 1309 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 A0A0U1RQF3 1178 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MAGEA13PA6NCF6 341 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 NVLO15381 856 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 RIPK2O43353 540 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CACNG3O60359 315 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DAB1O75553 588 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TJP3O95049 919 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CXCL8P10145 99 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 RRM1P23921 792 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 HOXD10P28358 340 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 VHLP40337 213 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 NR2C2P49116 596 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 INHBCP55103 352 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SEMA3BQ13214 749 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DPYSL2Q16555 572 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 FAM47CQ5HY64 1035 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PCGF5Q86SE9 256 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TRIM42Q8IWZ5 723 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 HACE1Q8IYU2 909 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MIPOL1Q8TD10 442 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SNRNP27Q8WVK2 155 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 CNPY3Q9BT09 278 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DDX23Q9BUQ8 820 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 NT5C1AQ9BXI3 368 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 FTHL17Q9BXU8 183 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 BRD8Q9H0E9 1235 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MYLK2Q9H1R3 596 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GOLPH3Q9H4A6 298 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 EIF2B3Q9NR50 452 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 KLHL14Q9P2G3 628 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CYTH4Q9UIA0 394 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PCDHB4Q9Y5E5 795 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MYO16Q9Y6X6 1858 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SMIM28A0A1B0GU29 152 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 BCLAF3A2AJT9 711 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 CFAP69A5D8W1 941 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 HHLA1C9JL84 531 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 H0Y3Z8 333 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PTGESO14684 152 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 RASGRF2O14827 1237 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 LIASO43766 372 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TBC1D4O60343 1298 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 MICAL2O94851 1124 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 IL1BP01584 269 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 T-ENOLP0DO92 83 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms