RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 TSPY1Q01534 308 aa21.13■□□□□ 0.97
PRKCD-202ENST00000394729 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.13■□□□□ 0.971e-15■■■■■ 72.2
PRKCD-202ENST00000394729 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
PRKCD-202ENST00000394729 EYSQ5T1H1 3165 aa21.13■□□□□ 0.97
PRKCD-202ENST00000394729 SCN5AQ14524 2016 aa21.13■□□□□ 0.97
PRKCD-202ENST00000394729 CEP290O15078 2479 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 TMEM63AO94886 807 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 LTFP02788 710 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 ITGAVP06756 1048 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 ACAP1Q15027 740 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 TRIM60Q495X7 471 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 ZDHHC17Q8IUH5 632 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 EIF1ADQ8N9N8 165 aaKnown RBP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 NKD2Q969F2 451 aaPredicted RBP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 PPANQ9NQ55 473 aaKnown RBP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 RGS16O15492 202 aaPredicted RBP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 LMNB2Q03252 620 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 SLMAPQ14BN4 828 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 GLIPR1L2Q4G1C9 344 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 FAM26DQ5JW98 314 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 FNBP1LQ5T0N5 605 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 HIBCHQ6NVY1 386 aaPredicted RBP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 DCLRE1AQ6PJP8 1040 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.12■□□□□ 0.97
PRKCD-202ENST00000394729 THEM5Q8N1Q8 247 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 CPT1BQ92523 772 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 CAPS2Q9BXY5 557 aa21.12■□□□□ 0.97
PRKCD-202ENST00000394729 MDM4O15151 490 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 APRTP07741 180 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 SEC24CP53992 1094 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 TLE2Q04725 743 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 KCNT2Q6UVM3 1135 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 EXOC4Q96A65 974 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 RASGRF2O14827 1237 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 SSTR1P30872 391 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 MAGEA4P43358 317 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 SLC5A3P53794 718 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 AP1B1Q10567 949 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 TFDP2Q14188 446 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 TAS1R1Q7RTX1 841 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 COLGALT2Q8IYK4 626 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 REM2Q8IYK8 340 aaPredicted RBP21.11■□□□□ 0.97
PRKCD-202ENST00000394729 ACBD6Q9BR61 282 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 PRDM5Q9NQX1 630 aaPredicted RBP21.11■□□□□ 0.97
PRKCD-202ENST00000394729 XPO7Q9UIA9 1087 aaKnown RBP21.11■□□□□ 0.97
PRKCD-202ENST00000394729 STAP1Q9ULZ2 295 aa21.11■□□□□ 0.97
PRKCD-202ENST00000394729 KCNK1O00180 336 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 DPYSL4O14531 572 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 NOS2P35228 1153 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 ACTN2P35609 894 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 ARL4AP40617 200 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 PTPN9P43378 593 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 NOMO1Q15155 1222 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 LCMT1Q9UIC8 334 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 HHLA1C9JL84 531 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 MFSD11O43934 449 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 CPB1P15086 417 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 EFTUD2Q15029 972 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■■ 33
PRKCD-202ENST00000394729 RNASEH2BQ5TBB1 312 aaKnown RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 PRSS55Q6UWB4 352 aaPredicted RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 FAF2Q96CS3 445 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 CELF6Q96J87 481 aaKnown RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 SEPT5Q99719 369 aaPredicted RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 TSEN34Q9BSV6 310 aaKnown RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 PHF24Q9UPV7 400 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 TTLL3Q9Y4R7 772 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 TTC4O95801 387 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 CTXN3Q4LDR2 81 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 VARS2Q5ST30 1063 aaKnown RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 RWDD4Q6NW29 188 aaKnown RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 TTC13Q8NBP0 860 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 SUSD3Q96L08 255 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 C11orf84Q9BUA3 381 aaPredicted RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 TKTL2Q9H0I9 626 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 PCDH9Q9HC56 1237 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 DMAP1Q9NPF5 467 aaPredicted RBP21.1■□□□□ 0.97
PRKCD-202ENST00000394729 CHMP2BQ9UQN3 213 aa21.1■□□□□ 0.97
PRKCD-202ENST00000394729 ANKRD65E5RJM6 399 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 TBX18O95935 607 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 OLIG2Q13516 323 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 LRRC14Q15048 493 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 SYDE1Q6ZW31 735 aaPredicted RBP21.09■□□□□ 0.97
PRKCD-202ENST00000394729 RNF139Q8WU17 664 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 FAM124BQ9H5Z6 455 aaPredicted RBP21.09■□□□□ 0.97
PRKCD-202ENST00000394729 HMBSP08397 361 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 RDXP35241 583 aaKnown RBP21.09■□□□□ 0.97
PRKCD-202ENST00000394729 IFNAR2P48551 515 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 PDK2Q15119 407 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 TAC4Q86UU9 113 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 TAX1BP1Q86VP1 789 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 CYP4X1Q8N118 509 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 NPY6RQ99463 290 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 DTLQ9NZJ0 730 aa21.09■□□□□ 0.97
PRKCD-202ENST00000394729 DNM1LO00429 736 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 DAB1O75553 588 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 SKIP12755 728 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 GRIA1P42261 906 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 SLC11A1P49279 550 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 BFSP2Q13515 415 aa21.08■□□□□ 0.97
PRKCD-202ENST00000394729 HIF1AQ16665 826 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms