RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 APOC2P02655 101 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 RPL17P18621 184 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 NOS2P35228 1153 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 RPL22P35268 128 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 SLCO1A2P46721 670 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 SNX16P57768 344 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 FAXCQ5TGI0 409 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 SPATA2LQ8IUW3 424 aaPredicted RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 THEM5Q8N1Q8 247 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 NT5C3BQ969T7 300 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 LRRC45Q96CN5 670 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 PAWRQ96IZ0 340 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 C9orf72Q96LT7 481 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 RUNDC3BQ96NL0 473 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 RUFY1Q96T51 708 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 FAM107BQ9H098 131 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 CYLDQ9NQC7 956 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 HOMER3Q9NSC5 361 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 BCCIPQ9P287 314 aaKnown RBP eCLIP15.55■□□□□ 0.08
MKS1-202ENST00000393119 FZD10Q9ULW2 581 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 PIAS1O75925 651 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 LTFP02788 710 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 ITIH2P19823 946 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 SLC5A3P53794 718 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 USP46P62068 366 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 TSPY1Q01534 308 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 DEUP1Q05D60 604 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 KYNUQ16719 465 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 BSPRYQ5W0U4 402 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 DARS2Q6PI48 645 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 CAPN12Q6ZSI9 719 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 P3H4Q92791 437 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 CSPG4P5Q96PW8 444 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 CDC42EP4Q9H3Q1 356 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 NMUR1Q9HB89 426 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 WDR6Q9NNW5 1121 aaKnown RBP15.55■□□□□ 0.08
MKS1-202ENST00000393119 OSER1Q9NX31 292 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 WHRNQ9P202 907 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 SFMBT1Q9UHJ3 866 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 ADAM28Q9UKQ2 775 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 H7C0C1 242 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 MDM4O15151 490 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 ADAM12O43184 909 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 MSI1O43347 362 aaKnown RBP15.54■□□□□ 0.08
MKS1-202ENST00000393119 ITGAVP06756 1048 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 RBL1P28749 1068 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 ATP5OP48047 213 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 LRRC26Q2I0M4 334 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 DRICH1Q6PGQ1 229 aaPredicted RBP15.54■□□□□ 0.08
MKS1-202ENST00000393119 ANKRD33Q7Z3H0 272 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 DMAP1Q9NPF5 467 aaPredicted RBP15.54■□□□□ 0.08
MKS1-202ENST00000393119 DDIT4Q9NX09 232 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 DRG1Q9Y295 367 aaKnown RBP15.54■□□□□ 0.08
MKS1-202ENST00000393119 TLDC2A0PJX2 215 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 ALDH2P05091 517 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 GALTP07902 379 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 MTMR3Q13615 1198 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 DPYSL2Q16555 572 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 CTXN3Q4LDR2 81 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 HIBCHQ6NVY1 386 aaPredicted RBP15.54■□□□□ 0.08
MKS1-202ENST00000393119 BNIPLQ7Z465 357 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 CCDC89Q8N998 374 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 RSAD2Q8WXG1 361 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 ZNF333Q96JL9 665 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 CEP41Q9BYV8 373 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 DSEQ9UL01 958 aa15.54■□□□□ 0.08
MKS1-202ENST00000393119 C2CD2LO14523 706 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 TNFRSF10BO14763 440 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 APOL1O14791 398 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 OAZ2O95190 189 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 VNN2O95498 520 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 ACRP10323 421 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 TYMPP19971 482 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 ATP1A2P50993 1020 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 STRADAQ7RTN6 431 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 TAC4Q86UU9 113 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 TEKT4Q8WW24 435 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.53■□□□□ 0.08
MKS1-202ENST00000393119 DNAI2Q9GZS0 605 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 CRISPLD2Q9H0B8 497 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 PABPC3Q9H361 631 aaKnown RBP15.53■□□□□ 0.08
MKS1-202ENST00000393119 USP29Q9HBJ7 922 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 CNGB3Q9NQW8 809 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.53■□□□□ 0.08
MKS1-202ENST00000393119 MTRF1LQ9UGC7 380 aaKnown RBP15.53■□□□□ 0.08
MKS1-202ENST00000393119 EFR3BQ9Y2G0 817 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 USP3Q9Y6I4 520 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 RIPK2O43353 540 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
MKS1-202ENST00000393119 SCNN1AP37088 669 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 PDK2Q15119 407 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 NCBP2-AS2Q69YL0 99 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 SLC9A4Q6AI14 798 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 ARCQ7LC44 396 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 SCD5Q86SK9 330 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 NPAS4Q8IUM7 802 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms