RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MTMR9Q96QG7 549 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TEX13BQ9BXU2 312 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 LRRC4CQ9HCJ2 640 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 VANGL2Q9ULK5 521 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ERGIC3Q9Y282 383 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 NALCNQ8IZF0 1738 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 A0A0A6YYK5 440 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CLRN2A0PK11 232 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TESPA1A2RU30 521 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ARHGEF35A5YM69 484 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 B8ZZF3 427 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TCP10L2B9ZVM9 353 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CLOCKO15516 846 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 FTLP02792 175 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 UBL4AP11441 157 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 IFI30P13284 250 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 COMTP21964 271 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PPP2R2BQ00005 443 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 EN1Q05925 392 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 NIPAL4Q0D2K0 466 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MOGSQ13724 837 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 LAMC2Q13753 1193 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CRY1Q16526 586 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM60Q495X7 471 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PAGE2BQ5JRK9 111 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MIIPQ5JXC2 388 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 NSMFQ6X4W1 530 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 DENND5BQ6ZUT9 1274 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 HPS6Q86YV9 775 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 RASGEF1CQ8N431 466 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SEZ6LQ9BYH1 1024 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CPVLQ9H3G5 476 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF696Q9H7X3 374 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 DCP1AQ9NPI6 582 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 BCS1LQ9Y276 419 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 NR2E1Q9Y466 385 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MYH13Q9UKX3 1938 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 RGS5O15539 181 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 RAD17O75943 681 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PLEKHA8P1O95397 391 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ASNSP08243 561 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 NPTX2P47972 431 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 AP3M2P53677 418 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 EMP3P54852 163 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 RAB14P61106 215 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MRPL28Q13084 256 aaKnown RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ACAP2Q15057 778 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 DLGAP5Q15398 846 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 BCL2A1Q16548 175 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 DGUOKQ16854 277 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 IFNL1Q8IU54 200 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TICAM1Q8IUC6 712 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PPM1NQ8N819 430 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PDPRQ8NCN5 879 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ANKK1Q8NFD2 765 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MAGEE1Q9HCI5 957 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PCYOX1Q9UHG3 505 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SLC24A2Q9UI40 661 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CEPT1Q9Y6K0 416 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PVALEFA0A1B0GWK0 134 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SAC3D1A6NKF1 404 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 LAD1O00515 517 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 HAT1O14929 419 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 HSPA4LO95757 839 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PRKCBP05771 671 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 AKR1B1P15121 316 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ALOX12P18054 663 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SLC9A1P19634 815 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 FGFR3P22607 806 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 HADHAP40939 763 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PRKCIP41743 596 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SEPHS1P49903 392 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 HIF1AQ16665 826 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CCDC58Q4VC31 144 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ZDHHC24Q6UX98 284 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 DGKHQ86XP1 1220 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MICU2Q8IYU8 434 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 PRELID2Q8N945 189 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 Q8N9G6 341 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SEPT8Q92599 483 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 KCNN1Q92952 543 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TMIGD2Q96BF3 282 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TUBGCP3Q96CW5 907 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CDK5RAP1Q96SZ6 601 aaKnown RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ZSWIM1Q9BR11 485 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM246Q9BRR3 403 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 CDH19Q9H159 772 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 EPB41L4AQ9HCS5 686 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ERVK-5Q9HDB9 667 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ZDHHC7Q9NXF8 308 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 KIAA1257Q9ULG3 409 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 SCAF8Q9UPN6 1271 aaKnown RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 ATF5Q9Y2D1 282 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-201ENST00000393077 GPSM3Q9Y4H4 160 aa7.85□□□□□ -1.15
VTI1A-201ENST00000393077 A0A1W2PQ67 120 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 IFNA16P05015 189 aa7.84□□□□□ -1.15
VTI1A-201ENST00000393077 IL10P22301 178 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms