RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PIH1D1Q9NWS0 290 aaKnown RBP11.24□□□□□ -0.61
BRF1-204ENST00000392557 G3BP2Q9UN86 482 aaKnown RBP11.24□□□□□ -0.61
BRF1-204ENST00000392557 SH3BP1Q9Y3L3 701 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 ADCY6O43306 1168 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 NCF2P19878 526 aaPredicted RBP11.24□□□□□ -0.61
BRF1-204ENST00000392557 IL1R2P27930 398 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 TNFAIP2Q03169 654 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 ZNF252P-AS1Q0IIN9 211 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 DPYSL3Q14195 570 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 DGKDQ16760 1214 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 ATG16L1Q676U5 607 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 IRGCQ6NXR0 463 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 RELL1Q8IUW5 271 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 IGDCC3Q8IVU1 814 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 SCUBE1Q8IWY4 988 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 AGR3Q8TD06 166 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 APOPT1Q96IL0 206 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
BRF1-204ENST00000392557 A6NHS1 94 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 STRNO43815 780 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 KDELR1P24390 212 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 BST1Q10588 318 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 SLC10A6Q3KNW5 377 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 CXCL16Q9H2A7 254 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 PPCSQ9HAB8 311 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 SNTG2Q9NY99 539 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 KLK14Q9P0G3 267 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 KIF3CO14782 793 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 B4GALT4O60513 344 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 LRCH4O75427 683 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 SNUPNO95149 360 aaKnown RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 MMP3P08254 477 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 RGS7P49802 495 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 AP2B1P63010 937 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 BEX3Q00994 111 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 RSPH3Q86UC2 560 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 NKD2Q969F2 451 aaPredicted RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 ZNF184Q99676 751 aaPredicted RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 MAP3K13O43283 966 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 PRPSAP2O60256 369 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 IL18RAPO95256 599 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 PROZP22891 400 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 MIPP30301 263 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 YWHAEP62258 255 aaKnown RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 ENPEPQ07075 957 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 PPP1R2P3Q6NXS1 205 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 RASSF3Q86WH2 238 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 RBM15BQ8NDT2 890 aaKnown RBP11.23□□□□□ -0.61
BRF1-204ENST00000392557 FBXO27Q8NI29 283 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 DEPDC1BQ8WUY9 529 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 DCAKDQ8WVC6 231 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 WWP1Q9H0M0 922 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 ABHD16BQ9H3Z7 469 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 SNX9Q9Y5X1 595 aa11.23□□□□□ -0.61
BRF1-204ENST00000392557 MYL3P08590 195 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SNRPAP09012 282 aaKnown RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 AKAP5P24588 427 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 NEK3P51956 506 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SPRYD7Q5W111 196 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 WDTC1Q8N5D0 677 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 C7orf31Q8N865 590 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ENDOVQ8N8Q3 282 aaKnown RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 C12orf29Q8N999 325 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 DPP3Q9NY33 737 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 LOC285556D6RIA3 1793 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 CCNG1P51959 295 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 BCAR1P56945 870 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 TAF1CQ15572 869 aaPredicted RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 CCL14Q16627 93 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 DUSP28Q4G0W2 176 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SLC26A11Q86WA9 606 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 NAT8LQ8N9F0 302 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 USP6NLQ92738 828 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ATXN7L3BQ96GX2 97 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 CPXM1Q96SM3 734 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 TXNDC16Q9P2K2 825 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 LNPEPQ9UIQ6 1025 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 USP18Q9UMW8 372 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SYNJ2BP-COX16A0A087WUM0 186 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 A0A0G2JMZ2 1700 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 E5RJQ4 531 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 TSPAN1O60635 241 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms