RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
TMCO1-202ENST00000392129 OXCT2Q9BYC2 517 aaPredicted RBP12.74□□□□□ -0.37
TMCO1-202ENST00000392129 C10orf88Q9H8K7 445 aa12.74□□□□□ -0.37
TMCO1-202ENST00000392129 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
TMCO1-202ENST00000392129 SYF2O95926 243 aaKnown RBP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 AMHP03971 560 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ETS1P14921 441 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 RAG1P15918 1043 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ADRA1BP35368 520 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ITGA8P53708 1063 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 AIF1P55008 147 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ARPP19P56211 112 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 FAM193AP78312 1265 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 CAV1Q03135 178 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 IFRD2Q12894 506 aaPredicted RBP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 C1orf228Q6PIY5 440 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 NUP93Q8N1F7 819 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 BBOF1Q8ND07 529 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ZNF689Q96CS4 500 aaPredicted RBP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ZIM3Q96PE6 472 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 DDIT4Q9NX09 232 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.378e-6■□□□□ 8.7
TMCO1-202ENST00000392129 RCOR3Q9P2K3 495 aaPredicted RBP12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ANAPC5Q9UJX4 755 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 ATP8A1Q9Y2Q0 1164 aa12.73□□□□□ -0.37
TMCO1-202ENST00000392129 MTMR11A4FU01 709 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 IFNB1P01574 187 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 CPB1P15086 417 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 GOT1P17174 413 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 ARL4AP40617 200 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 GPR15P49685 360 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 GDF10P55107 478 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 MTMR3Q13615 1198 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 USP41Q3LFD5 358 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 EFHC2Q5JST6 749 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SCD5Q86SK9 330 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 UNC45BQ8IWX7 931 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 TMEM199Q8N511 208 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 TTC9BQ8N6N2 239 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 RSAD2Q8WXG1 361 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 IGSF21Q96ID5 467 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 PCDH9Q9HC56 1237 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 ABCC13Q9NSE7 274 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 EFCAB14O75071 495 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 CXCR3P49682 368 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 PGFP49763 221 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 DEFB103AP81534 67 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SCAPQ12770 1279 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 P3H1Q32P28 736 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SPDYCQ5MJ68 293 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 BTBD8Q5XKL5 378 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 FAM117BQ6P1L5 589 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 KCNT2Q6UVM3 1135 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 TMCO2Q7Z6W1 182 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 TAC4Q86UU9 113 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 RNF168Q8IYW5 571 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 DQX1Q8TE96 717 aaKnown RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 RNF139Q8WU17 664 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 UBLCP1Q8WVY7 318 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 RIN2Q8WYP3 895 aaPredicted RBP12.72□□□□□ -0.37
TMCO1-202ENST00000392129 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 FAM204AQ9H8W3 233 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
TMCO1-202ENST00000392129 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.37
TMCO1-202ENST00000392129 I6L893 689 aaPredicted RBP12.71□□□□□ -0.37
TMCO1-202ENST00000392129 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
TMCO1-202ENST00000392129 VNN2O95498 520 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 IGLV3-25P01717 112 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 ACRP10323 421 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 AMPD1P23109 780 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 NR2C2P49116 596 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 PMS2P54278 862 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 WDR5P61964 334 aaKnown RBP12.71□□□□□ -0.37
TMCO1-202ENST00000392129 ROR1Q01973 937 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 GPS1Q13098 491 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 EIF4EBP2Q13542 120 aaPredicted RBP12.71□□□□□ -0.37
TMCO1-202ENST00000392129 SLMAPQ14BN4 828 aa12.71□□□□□ -0.37
TMCO1-202ENST00000392129 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms