RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CBX3Q13185 183 aa16.6■□□□□ 0.25
SHANK1-204ENST00000391814 ZNF846Q147U1 533 aa16.6■□□□□ 0.25
SHANK1-204ENST00000391814 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
SHANK1-204ENST00000391814 SPATA2LQ8IUW3 424 aaPredicted RBP16.6■□□□□ 0.25
SHANK1-204ENST00000391814 PPP1R2P1Q96PQ5 205 aa16.6■□□□□ 0.25
SHANK1-204ENST00000391814 KRCC1Q9NPI7 259 aaPredicted RBP16.6■□□□□ 0.25
SHANK1-204ENST00000391814 KCND1Q9NSA2 647 aa16.6■□□□□ 0.25
SHANK1-204ENST00000391814 METP08581 1390 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 EME2A4GXA9 379 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 BBOX1O75936 387 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 ABATP80404 500 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 FAM43BQ6ZT52 329 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 KRT73Q86Y46 540 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 AHI1Q8N157 1196 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 TUBA8Q9NY65 449 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 ADRA1DP25100 572 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 YY1P25490 414 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 KYAT1Q16773 422 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 TRPC4APQ8TEL6 797 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 GSTM1P09488 218 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 MYBL2P10244 700 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 NR1H2P55055 460 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 CDC16Q13042 620 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 STILQ15468 1287 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 GSTA3Q16772 222 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 C8orf59Q8N0T1 100 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 MAGEE2Q8TD90 523 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 FAM120BQ96EK7 910 aaKnown RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 FOSL2P15408 326 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 SSTR1P30872 391 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 RPL5P46777 297 aaKnown RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 RBP5P82980 135 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 AADACL2Q6P093 401 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 RAB42Q8N4Z0 105 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 OR7A2PQ8NGA2 310 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 CATSPERBQ9H7T0 1116 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 JPH1Q9HDC5 661 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-204ENST00000391814 SEC24AO95486 1093 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 AKR1D1P51857 326 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 TAB1Q15750 504 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 HS6ST3Q8IZP7 471 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 NSMCE2Q96MF7 247 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 MUC3BQ9H195 1237 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 KCND2Q9NZV8 630 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 PACSIN3Q9UKS6 424 aa16.59■□□□□ 0.25
SHANK1-204ENST00000391814 DPPA5A6NC42 116 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 UBXN8O00124 270 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 MRASO14807 208 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 EFNA5P52803 228 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 FAAP100Q0VG06 881 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 QKIQ96PU8 341 aaKnown RBP eCLIP16.58■□□□□ 0.25
SHANK1-204ENST00000391814 GGA2Q9UJY4 613 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 SNX8Q9Y5X2 465 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 IRF1P10914 325 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 NELFEP18615 380 aaKnown RBP16.58■□□□□ 0.25
SHANK1-204ENST00000391814 DDX39BQ13838 428 aaKnown RBP16.58■□□□□ 0.25
SHANK1-204ENST00000391814 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.25
SHANK1-204ENST00000391814 UBE2OQ9C0C9 1292 aaKnown RBP16.58■□□□□ 0.25
SHANK1-204ENST00000391814 LIMD1Q9UGP4 676 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 NDUFAF1Q9Y375 327 aa16.58■□□□□ 0.25
SHANK1-204ENST00000391814 WFS1O76024 890 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 ZNF37AP17032 561 aaPredicted RBP16.58■□□□□ 0.24
SHANK1-204ENST00000391814 PYDC2Q56P42 97 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 CYP4Z1Q86W10 505 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 ELMOD1Q8N336 334 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 PGM2Q96G03 612 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 KCNK4Q9NYG8 393 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 ELK3P41970 407 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 FIGNQ5HY92 759 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 LLGL2Q6P1M3 1020 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 PHF21BQ96EK2 531 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 CITED4Q96RK1 184 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 ZFYVE1Q9HBF4 777 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 TRMT13Q9NUP7 481 aaKnown RBP16.58■□□□□ 0.24
SHANK1-204ENST00000391814 VTI1BQ9UEU0 232 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 ZC3H4Q9UPT8 1303 aaKnown RBP16.58■□□□□ 0.24
SHANK1-204ENST00000391814 GUCY1B2O75343 617 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 FAM86B2P0C5J1 330 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHANK1-204ENST00000391814 DENND6AQ8IWF6 608 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 CCDC167Q9P0B6 97 aa16.58■□□□□ 0.24
SHANK1-204ENST00000391814 CROCC2H7BZ55 1655 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 VAV1P15498 845 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 EXOC3L1Q86VI1 746 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 LRRC49Q8IUZ0 686 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 BPIFB6Q8NFQ5 453 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 TINF2Q9BSI4 451 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 EMC2Q15006 297 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 ZIK1Q3SY52 487 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-204ENST00000391814 TTC7BQ86TV6 843 aa16.57■□□□□ 0.24
SHANK1-204ENST00000391814 PCDH20Q8N6Y1 951 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms