RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 SMAD3P84022 425 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 OTUD4Q01804 1114 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 GUCY1A3Q02108 690 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CYP27A1Q02318 531 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 GFPT1Q06210 699 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SCN1BQ07699 218 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 FAAP100Q0VG06 881 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 GALNT2Q10471 571 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TUBB2AQ13885 445 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CBFBQ13951 182 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RCN2Q14257 317 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KRT31Q15323 416 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RAB30Q15771 203 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 PRICKLE4Q2TBC4 344 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TWISTNBQ3B726 338 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KMT5BQ4FZB7 885 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SLC9B1Q4ZJI4 515 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 LRRC23Q53EV4 343 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TMEM177Q53S58 311 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 FSCBQ5H9T9 825 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CEP78Q5JTW2 689 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RIPPLY2Q5TAB7 128 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ATG16L1Q676U5 607 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SCARA3Q6AZY7 606 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KRT80Q6KB66 452 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 INO80CQ6PI98 192 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 FAM111BQ6SJ93 734 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KDM7AQ6ZMT4 941 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KIF6Q6ZMV9 814 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ATG14Q6ZNE5 492 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CATSPERGQ6ZRH7 1159 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 BEND4Q6ZU67 534 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 C3orf67Q6ZVT6 689 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 USP49Q70CQ1 688 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KRT28Q7Z3Y7 464 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ANKS1BQ7Z6G8 1248 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RTN4RL1Q86UN2 441 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ZNF679Q8IYX0 411 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SFRP1Q8N474 314 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ARFGAP2Q8N6H7 521 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 BANPQ8N9N5 519 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ZNF610Q8N9Z0 462 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 C3orf20Q8ND61 904 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 BVESQ8NE79 360 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TRPV1Q8NER1 839 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CDC26Q8NHZ8 85 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SETD6Q8TBK2 473 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 URGCPQ8TCY9 931 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 WHAMMQ8TF30 809 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TSPEARQ8WU66 669 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 C7orf43Q8WVR3 580 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 LPIN2Q92539 896 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SLC22A18Q96BI1 424 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 HDAC11Q96DB2 347 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 XAGE2Q96GT9 111 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SNF8Q96H20 258 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 FAM71F1Q96KD3 344 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RPGRIP1Q96KN7 1286 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 NEU1Q99519 415 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 P2RX7Q99572 595 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 OSMRQ99650 979 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TSG101Q99816 390 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 C19orf43Q9BQ61 176 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SYT17Q9BSW7 474 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 MLPHQ9BV36 600 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TUBB2BQ9BVA1 445 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 HEMGNQ9BXL5 484 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 EIF2AQ9BY44 585 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ACE2Q9BYF1 805 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CELF4Q9BZC1 486 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 ZDHHC5Q9C0B5 715 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 KLHL25Q9H0H3 589 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RIBC2Q9H4K1 309 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SYNDIG1Q9H7V2 258 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TMEM206Q9H813 350 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 COQ10BQ9H8M1 238 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SEPSECSQ9HD40 501 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 SH2B1Q9NRF2 756 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 AGPAT3Q9NRZ7 376 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 MRPL15Q9P015 296 aaKnown RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 REV1Q9UBZ9 1251 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 RSPH14Q9UHP6 348 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 OGDHLQ9ULD0 1010 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 CHKBQ9Y259 395 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 MAN2B2Q9Y2E5 1009 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 BTBD3Q9Y2F9 522 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 USP20Q9Y2K6 914 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 HRH3Q9Y5N1 445 aa3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.53□□□□□ -1.84
TRAJ17-201ENST00000390520 DENND3A2RUS2 1198 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 TMEM221A6NGB7 291 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 URADA6NGE7 173 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 HMX3A6NHT5 357 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 SLC15A5A6NIM6 579 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 AHRRA9YTQ3 701 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 E9PI62 339 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 E9PMD0 336 aa3.52□□□□□ -1.85
TRAJ17-201ENST00000390520 H0Y8G0 127 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms