RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 MFSD1Q9H3U5 465 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 MRGBPQ9NV56 204 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 WHRNQ9P202 907 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 VAV3Q9UKW4 847 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 NCKAP1Q9Y2A7 1128 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 PHF20L1A8MW92 1017 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 CHN1P15882 459 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 ARF4P18085 180 aaPredicted RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 POLR2EP19388 210 aaKnown RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 AMPD1P23109 780 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 SLC29A2Q14542 456 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 FNDC3BQ53EP0 1204 aaKnown RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 WNT8BQ93098 351 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 SGF29Q96ES7 293 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 NFKBIZQ9BYH8 718 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 IARS2Q9NSE4 1012 aaKnown RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 UBP1Q9NZI7 540 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 NUDT5Q9UKK9 219 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 HDCP19113 662 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 PBLDP30039 288 aaPredicted RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 ALDH18A1P54886 795 aaKnown RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 FUT2Q10981 343 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 LRRC8EQ6NSJ5 796 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 WDR59Q6PJI9 974 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 GLIS3Q8NEA6 775 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 MARCOQ9UEW3 520 aaPredicted RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 SPTLC1O15269 473 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 TOMM70O94826 608 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 NR2C2P49116 596 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 LRRC52Q8N7C0 313 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 SUSD6Q92537 303 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 C12orf42Q96LP6 360 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 OSGEPL1Q9H4B0 414 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 UBA2Q9UBT2 640 aaPredicted RBP10.58□□□□□ -0.72
PKP4-201ENST00000389757 VANGL2Q9ULK5 521 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 RNF112Q9ULX5 631 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 FAM95CA0A1B0GW59 222 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 DDX3XO00571 662 aaKnown RBP eCLIP10.58□□□□□ -0.727e-20■■□□□ 13.2
PKP4-201ENST00000389757 TRIM16O95361 564 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 CCNE2O96020 404 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 STMN1P16949 149 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 TUSC3Q13454 348 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 TPGS1Q6ZTW0 290 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 DNAAF5Q86Y56 855 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 APBB2Q92870 758 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 LENG9Q96B70 501 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 FUCA2Q9BTY2 467 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 TRHDEQ9UKU6 1024 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 CDYLQ9Y232 598 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
PKP4-201ENST00000389757 LAG3P18627 525 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 CYP2C18P33260 490 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 PLA2G4AP47712 749 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 INPP1P49441 399 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SERPINB8P50452 374 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 RAP1GDS1P52306 607 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 EIF2B5Q13144 721 aaKnown RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 CAMK2GQ13555 558 aaPredicted RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
PKP4-201ENST00000389757 VPS37AQ8NEZ2 397 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 KAT2BQ92831 832 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 FAM161BQ96MY7 647 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 PRPF18Q99633 342 aaKnown RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 THEGQ9P2T0 379 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 TBC1D3BA6NDS4 549 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 INHAP05111 366 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 MIPP30301 263 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 ICAM3P32942 547 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 C16orf59Q7L2K0 433 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 RFWD2Q8NHY2 731 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SLC28A3Q9HAS3 691 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 NMRK1Q9NWW6 199 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SELENONQ9NZV5 590 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 RNF103-CHMP3A0A140T963 221 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 FAM237AA0A1B0GTK4 181 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 RFC1P35251 1148 aaPredicted RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 CDH17Q12864 832 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 DENND1BQ6P3S1 775 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SLC24A5Q71RS6 500 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 LRRC8DQ7L1W4 858 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 HTR3CQ8WXA8 447 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SKA1Q96BD8 255 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 MRPL46Q9H2W6 279 aaKnown RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 NXF3Q9H4D5 531 aaKnown RBP10.57□□□□□ -0.72
PKP4-201ENST00000389757 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 PCDH9Q9HC56 1237 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 SYTL2Q9HCH5 934 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 PTCH2Q9Y6C5 1203 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 TMEM120BA0PK00 339 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 PEX10O60683 326 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 CXCL14O95715 111 aa10.57□□□□□ -0.72
PKP4-201ENST00000389757 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms