RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 LPAR1Q92633 364 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 WDR27A2RRH5 827 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 TAF4O00268 1085 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 VDRP11473 427 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 TNFRSF8P28908 595 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 PKNOX1P55347 436 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 CDC42EP1Q00587 391 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 SLC22A9Q8IVM8 553 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 MCOLN2Q8IZK6 566 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 EID3Q8N140 333 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 RNF145Q96MT1 663 aa12.85□□□□□ -0.35
FANCA-202ENST00000389301 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 MAGEB2O15479 319 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PCSK1P29120 753 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 STK32CQ86UX6 486 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PHF21BQ96EK2 531 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 C9orf16Q9BUW7 83 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PRKAG2Q9UGJ0 569 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 VANGL2Q9ULK5 521 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 DUSP12Q9UNI6 340 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 CHKBQ9Y259 395 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 IPPQ9Y573 584 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 ALOX15P16050 662 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 DGCR6LQ9BY27 220 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PTPRHQ9HD43 1115 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 NDUFAF1Q9Y375 327 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SNPHO15079 494 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 TADA2AO75478 443 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 KRT36O76013 467 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ATP5BP06576 529 aaKnown RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 CCDC130P13994 396 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 GSSP48637 474 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 TAF5Q15542 800 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 MEA1Q16626 185 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ERMARDQ5T6L9 678 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 GRTP1Q5TC63 336 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 NET1Q7Z628 596 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 GINS4Q9BRT9 223 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 PGM3O95394 542 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 EIF2S1P05198 315 aaKnown RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 CTSHP09668 335 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SNX17Q15036 470 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 FAM180AQ6UWF9 173 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
FANCA-202ENST00000389301 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 C1orf50Q9BV19 199 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SERHL2Q9H4I8 314 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 FANCEQ9HB96 536 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 SERHLQ9NQF3 203 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
FANCA-202ENST00000389301 ABCA8O94911 1581 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.351e-11■□□□□ 10.2
FANCA-202ENST00000389301 ENTPD5O75356 428 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.35
FANCA-202ENST00000389301 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.35
FANCA-202ENST00000389301 PDK3Q15120 406 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 RNF43Q68DV7 783 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 MARK2Q7KZI7 788 aaKnown RBP12.83□□□□□ -0.35
FANCA-202ENST00000389301 DUSP9Q99956 384 aaKnown RBP12.83□□□□□ -0.35
FANCA-202ENST00000389301 TBC1D10AQ9BXI6 508 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 DNAJC18Q9H819 358 aa12.83□□□□□ -0.35
FANCA-202ENST00000389301 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.35
FANCA-202ENST00000389301 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 CYP2F1P24903 491 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 CAPZA2P47755 286 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 NPTX2P47972 431 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 TAF6P49848 677 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 CYP24A1Q07973 514 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 ST3GAL1Q11201 340 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 ACAP1Q15027 740 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 Q4G0T1 1027 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
FANCA-202ENST00000389301 FAM228AQ86W67 206 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
FANCA-202ENST00000389301 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms