RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 VSTM1Q6UX27 236 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 SERPINA13PQ6UXR4 307 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 BCDIN3DQ7Z5W3 292 aaKnown RBP3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 AMIGO2Q86SJ2 522 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 P3H2Q8IVL5 708 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 NRSN1Q8IZ57 195 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 CLASRPQ8N2M8 674 aaKnown RBP3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 LINC01465Q8N7H1 131 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 SEMA6DQ8NFY4 1073 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 FAM71BQ8TC56 605 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 EID2BQ96D98 161 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 LTV1Q96GA3 475 aaPredicted RBP3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 HS6ST2Q96MM7 605 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 PRPF18Q99633 342 aaKnown RBP3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 TP63Q9H3D4 680 aaPredicted RBP3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 ADAM21Q9UKJ8 722 aa3.22□□□□□ -1.89
RNU6-48P-201ENST00000384161 AOX1Q06278 1338 aa3.21□□□□□ -1.89
RNU6-48P-201ENST00000384161 hCG_1642624A0A1W2PR95 340 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 LRRC3CA6NJW4 275 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 TTC34A8MYJ7 566 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PIP5K1BO14986 540 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 GCATO75600 419 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 USP1O94782 785 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PDE8BO95263 885 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 LDHAP00338 332 aaKnown RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PRKCGP05129 697 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 ANXA6P08133 673 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 ITGA5P08648 1049 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 TMIGD3P0DMS9 266 aaPredicted RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 DUSP1P28562 367 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PBX1P40424 430 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PTH2RP49190 550 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 COPB1P53618 953 aaKnown RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 TUBA4AP68366 448 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 FHL3Q13643 280 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 BLMHQ13867 455 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PFKFB4Q16877 469 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PROSER3Q2NL68 480 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 TMEM196Q5HYL7 178 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 ATPAF1Q5TC12 328 aaPredicted RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 FAM90A2PQ658T7 463 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 CCDC144NLQ6NUI1 221 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 TMEM65Q6PI78 240 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 EDC3Q96F86 508 aaKnown RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 HIC2Q96JB3 615 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 MMS19Q96T76 1030 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PAAF1Q9BRP4 392 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 CRB3Q9BUF7 120 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 RNF26Q9BY78 433 aaPredicted RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 KRTAP1-5Q9BYS1 174 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 SEMA4CQ9C0C4 833 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 R3HDMLQ9H3Y0 253 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 PRDM13Q9H4Q3 707 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 USP29Q9HBJ7 922 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 AS3MTQ9HBK9 375 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 HERC5Q9UII4 1024 aaKnown RBP3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 FZD4Q9ULV1 537 aa3.21□□□□□ -1.9
RNU6-48P-201ENST00000384161 ARHGEF17Q96PE2 2063 aaPredicted RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 TCRBV5S1A1TA0A578 114 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 TMEM232C9JQI7 657 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 J3KTA2 159 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 SYT5O00445 386 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 NPC1O15118 1278 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 CTIFO43310 598 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 DHHO43323 396 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 USP12O75317 370 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 CSTBP04080 98 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 ITGA2BP08514 1039 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 APEHP13798 732 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 DRD1P21728 446 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 FPR3P25089 353 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 CERS1P27544 350 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 IGHMBP2P38935 993 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 GPC5P78333 572 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 DEUP1Q05D60 604 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 FOXO1Q12778 655 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 BFSP2Q13515 415 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 CBFBQ13951 182 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 LARS2Q15031 903 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 FAM187BQ17R55 369 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 P3H1Q32P28 736 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 PRAMEF17Q5VTA0 474 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 GRHL2Q6ISB3 625 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 ACSM6Q6P461 480 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 ZNF788Q6ZQV5 615 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 DCDC5Q6ZRR9 648 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 KRT27Q7Z3Y8 459 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 C16orf71Q8IYS4 520 aaPredicted RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 OR52L2PQ8NGH6 319 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 MAFAQ8NHW3 353 aaPredicted RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 IPO4Q8TEX9 1081 aaKnown RBP3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 POF1BQ8WVV4 589 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 GLMPQ8WWB7 406 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 C18orf8Q96DM3 657 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 FAR2Q96K12 515 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 ASB2Q96Q27 587 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 OBP2BQ9NPH6 170 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 FBXO28Q9NVF7 368 aa3.2□□□□□ -1.9
RNU6-48P-201ENST00000384161 IGSF9Q9P2J2 1179 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms