RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 CTC1Q2NKJ3 1217 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 BNC2Q6ZN30 1099 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 PCDH20Q8N6Y1 951 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 TARS2Q9BW92 718 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 hCG_1818297A0A087WSY0 165 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 C1orf232A0A0U1RR37 186 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 DDTLA6NHG4 134 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 OATP04181 439 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 SERPINA6P08185 405 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 RALBP11234 206 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 STT3AP46977 705 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 NEDD8Q15843 81 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 TRIM72Q6ZMU5 477 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 NANOGNBQ7Z5D8 188 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 TDRPQ86YL5 185 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 ZFP28Q8NHY6 868 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 DDI1Q8WTU0 396 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 AVENQ9NQS1 362 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 ZNF536O15090 1300 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 TPD52L2O43399 206 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 SIN3BO75182 1162 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 PABPC4LP0CB38 370 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 CRABP2P29373 138 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 GMPRP36959 345 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 OLFML1Q6UWY5 402 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 LENG9Q96B70 501 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 ABHD8Q96I13 439 aa12.55□□□□□ -0.4
SHOX-203ENST00000381578 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
SHOX-203ENST00000381578 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 CXorf49A8MYA2 514 aaPredicted RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 ITM2AO43736 263 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 MTTPP55157 894 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 TLR1Q15399 786 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 MYLK3Q32MK0 819 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 DAW1Q8N136 415 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 SLCO2A1Q92959 643 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 SYT11Q9BT88 431 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 RSL24D1Q9UHA3 163 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 BRWD3Q6RI45 1802 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 CYP3A7-CYP3A51PA0A087WV96 503 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 PSMD10O75832 226 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 CRTAMO95727 393 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 CYP3A7P24462 503 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 DMPKQ09013 629 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 MOXD1Q6UVY6 613 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 POLR3FQ9H1D9 316 aaPredicted RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 PLLPQ9Y342 182 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 TP73O15350 636 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 ATP9BO43861 1147 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 GARSP41250 739 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 SLC5A3P53794 718 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 TAF5Q15542 800 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 APOBEC3HQ6NTF7 200 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 EFHD1Q9BUP0 239 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 TRNAU1APQ9NX07 287 aaKnown RBP12.54□□□□□ -0.4
SHOX-203ENST00000381578 TLK1Q9UKI8 766 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 DMTF1Q9Y222 760 aa12.54□□□□□ -0.4
SHOX-203ENST00000381578 SIGLEC16A6NMB1 481 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 M0QYV0 167 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 COX4I1P13073 169 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 EPHA3P29320 983 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 GRIA2P42262 883 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ENTPD1P49961 510 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 NR1H2P55055 460 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CSE1LP55060 971 aaKnown RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 NME5P56597 212 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 NOMO3P69849 1222 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ITGADQ13349 1161 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 TFDP2Q14188 446 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 TBCCQ15814 346 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CCDC14Q49A88 953 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 TRMT10BQ6PF06 316 aaKnown RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 SLC44A1Q8WWI5 657 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 RMND5BQ96G75 393 aaPredicted RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 TLE6Q9H808 572 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 KCNK13Q9HB14 408 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms