RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 RAPH1Q70E73 1250 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 COLGALT1Q8NBJ5 622 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 C10orf82Q8WW14 230 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 ABCG1P45844 678 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 RABGGTBP53611 331 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 BCAT1P54687 386 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 DEUP1Q05D60 604 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 GALNTL6Q49A17 601 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 CLNKQ7Z7G1 428 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 RASSF3Q86WH2 238 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 WDR75Q8IWA0 830 aaKnown RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 FAM13CQ8NE31 585 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 PPP1R36Q96LQ0 422 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 ZNF395Q9H8N7 513 aaPredicted RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 ARL8BQ9NVJ2 186 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 RGS17Q9UGC6 210 aaPredicted RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 CLDN5O00501 218 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 SKAP2O75563 359 aaPredicted RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 PROZP22891 400 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 BST1Q10588 318 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 BST2Q10589 180 aaKnown RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 SLC27A1Q6PCB7 646 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 DSTYKQ6XUX3 929 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 TNIP3Q96KP6 325 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 ZNF560Q96MR9 790 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 TBCBQ99426 244 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 TUBB6Q9BUF5 446 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 STAP1Q9ULZ2 295 aa20.18■□□□□ 0.82
FOXC1-201ENST00000380874 UBQLN1Q9UMX0 589 aaKnown RBP20.18■□□□□ 0.82
FOXC1-201ENST00000380874 SPECC1L-ADORA2AF8WAN1 911 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 METTL18O95568 372 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 LMO2P25791 158 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 PPIL2Q13356 520 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 BZW1Q7L1Q6 419 aaKnown RBP20.17■□□□□ 0.82
FOXC1-201ENST00000380874 TTC7BQ86TV6 843 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 RSPH3Q86UC2 560 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 ALYREFQ86V81 257 aaKnown RBP20.17■□□□□ 0.82
FOXC1-201ENST00000380874 GSDMBQ8TAX9 411 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 SLC17A6Q9P2U8 582 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 CYP3A5P20815 502 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 MGAT1P26572 445 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 ANKRD20A2Q5SQ80 823 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 ANKRD20A1Q5TYW2 823 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 RWDD4Q6NW29 188 aaKnown RBP20.17■□□□□ 0.82
FOXC1-201ENST00000380874 UNC5AQ6ZN44 842 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 THTPAQ9BU02 230 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 SIK2Q9H0K1 926 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 CYP4F11Q9HBI6 524 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 MCM8Q9UJA3 840 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 C2CD2LO14523 706 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 KCNA4P22459 653 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 EPHB1P54762 984 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 UNC5BQ8IZJ1 945 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 MPP5Q8N3R9 675 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 USP33Q8TEY7 942 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 SREK1Q8WXA9 508 aaKnown RBP20.17■□□□□ 0.82
FOXC1-201ENST00000380874 SCYL1Q96KG9 808 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 TTC1Q99614 292 aa20.17■□□□□ 0.82
FOXC1-201ENST00000380874 KPNA7A9QM74 516 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 SOCS7O14512 581 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 CTSHP09668 335 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 TAF6P49848 677 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 RCN1Q15293 331 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 HTR3CQ8WXA8 447 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 WWP1Q9H0M0 922 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 GBA2Q9HCG7 927 aaPredicted RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 RPS6KL1Q9Y6S9 549 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 CNMDO75829 334 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 GARSP41250 739 aaKnown RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 RIPK1Q13546 671 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 ADGRF2Q8IZF7 708 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 CCDC185Q8N715 623 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 XAB2Q9HCS7 855 aaKnown RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 EEF2KO00418 725 aaKnown RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 MLH1P40692 756 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 PDZD4Q76G19 769 aaPredicted RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 KDELC2Q7Z4H8 507 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 USP6NLQ92738 828 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 LENG1Q96BZ8 264 aaPredicted RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 CCDC124Q96CT7 223 aaKnown RBP20.16■□□□□ 0.82
FOXC1-201ENST00000380874 UBP1Q9NZI7 540 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 MFHAS1Q9Y4C4 1052 aa20.16■□□□□ 0.82
FOXC1-201ENST00000380874 TOP3BO95985 862 aaKnown RBP20.15■□□□□ 0.82
FOXC1-201ENST00000380874 MAP3K7CLP57077 242 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 ZNF669Q96BR6 464 aaPredicted RBP20.15■□□□□ 0.82
FOXC1-201ENST00000380874 OXNAD1Q96HP4 312 aaPredicted RBP20.15■□□□□ 0.82
FOXC1-201ENST00000380874 CXCL16Q9H2A7 254 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 M0QZ92 97 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 EPHX2P34913 555 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 CDK16Q00536 496 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 PAN2Q504Q3 1202 aaKnown RBP20.15■□□□□ 0.82
FOXC1-201ENST00000380874 TRNP1Q6NT89 227 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 RNF103O00237 685 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 GTF2A2P52657 109 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 HDAC4P56524 1084 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 THOC5Q13769 683 aaKnown RBP20.15■□□□□ 0.82
FOXC1-201ENST00000380874 EFHC1Q5JVL4 640 aa20.15■□□□□ 0.82
FOXC1-201ENST00000380874 PIGZQ86VD9 579 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms