RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.864e-6■□□□□ 10.9
HMGN1-202ENST00000380747 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 FAM71AQ8IYT1 594 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 PJA1Q8NG27 643 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 OSCP1Q8WVF1 389 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 KCTD13Q8WZ19 329 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 FAM3CQ92520 227 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 CEP295Q9C0D2 2601 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 MIS12Q9H081 205 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 GANQ9H2C0 597 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 EBF3Q9H4W6 596 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 NLRC4Q9NPP4 1024 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 PLCB1Q9NQ66 1216 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 PRDM9Q9NQV7 894 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGN1-202ENST00000380747 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 RASAL2Q9UJF2 1139 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 FBXO4Q9UKT5 387 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 NDRG2Q9UN36 371 aaKnown RBP9.69□□□□□ -0.86
HMGN1-202ENST00000380747 SIK3Q9Y2K2 1263 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 SH3BP1Q9Y3L3 701 aa9.69□□□□□ -0.86
HMGN1-202ENST00000380747 GREB1Q4ZG55 1949 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 OBSL1O75147 1896 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 COL4A3Q01955 1670 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 LRRC10BA6NIK2 292 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 FAM170BA6NMN3 283 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 GOLGA6L19H0YKK7 550 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 EPHB6O15197 1021 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 SERPINC1P01008 464 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 DCNP07585 359 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 HMBSP08397 361 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 KRT9P35527 623 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 GPD2P43304 727 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 BPIFB4P59827 614 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 PM20D1Q6GTS8 502 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 APTXQ7Z2E3 356 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 SLC47A2Q86VL8 602 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 MIB1Q86YT6 1006 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 MAML2Q8IZL2 1156 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 CPA6Q8N4T0 437 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 HSFY1Q96LI6 401 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 SPAG5Q96R06 1193 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 HINFPQ9BQA5 517 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 FAM83CQ9BQN1 747 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 DDX23Q9BUQ8 820 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 STK33Q9BYT3 514 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 CNTNAP3Q9BZ76 1288 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 C8orf33Q9H7E9 229 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 LTB4R2Q9NPC1 389 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 HPS4Q9NQG7 708 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 CNGB3Q9NQW8 809 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 LSM7Q9UK45 103 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 MRPS17Q9Y2R5 130 aaKnown RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 MTF2Q9Y483 593 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-202ENST00000380747 PCDHGA2Q9Y5H1 932 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
HMGN1-202ENST00000380747 E2F8A0AVK6 867 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 YJEFN3A6XGL0 299 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 PRR5-ARHGAP8B1AHC4 643 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 E7ENQ6 273 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 F8VZ95 297 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 SPECC1L-ADORA2AF8WAN1 911 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 TEX33O43247 280 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 KRT37O76014 449 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 GFPT2O94808 682 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 FBXO21O94952 628 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 NFATC1O95644 943 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 CAVIN2O95810 425 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 ADH1BP00325 375 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 GLULP15104 373 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 CTHP32929 405 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 STAT1P42224 750 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 MAGEA9P43362 315 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 ACADSBP45954 432 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 DAOAP59103 153 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 ARHGAP8P85298 464 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 GOLGA8FQ08AF8 430 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 GOLGA8DPQ0D2H9 430 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 EFEMP1Q12805 493 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 NR1H3Q13133 447 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 MEA1Q16626 185 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 PTPRNQ16849 979 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 EML3Q32P44 896 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 TAF3Q5VWG9 929 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms