RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 KCNK16Q96T55 309 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 CHKBQ9Y259 395 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 POLR2AP24928 1970 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 RASSF9O75901 435 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 DCTN3O75935 186 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 B3GAT3O94766 335 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 HMBSP08397 361 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 GJA5P36382 358 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 ZNF132P52740 706 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 PCSK7Q16549 785 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 PPM1JQ5JR12 505 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 CXCL17Q6UXB2 119 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 GPR142Q7Z601 462 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 PNPLA1Q8N8W4 532 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
DNMT3A-203ENST00000380746 C5orf60A6NFR6 353 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 C2CD4BA6NLJ0 364 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 ZMPSTE24O75844 475 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 STIP1P31948 543 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TKTL1P51854 596 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 AQP5P55064 265 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TAF1CQ15572 869 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 PPP4R1Q8TF05 950 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 EXT2Q93063 718 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 NKD2Q969F2 451 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 ASB7Q9H672 318 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 IGKV6D-21A0A0A0MT36 114 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 B2RBV5 119 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 CFLARO15519 480 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 AP1G2O75843 785 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 KRT38O76015 456 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 ASMTLO95671 621 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SNRPAP09012 282 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 PSMB4P28070 264 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 ARL1P40616 181 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SERPINB4P48594 390 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 AFF1P51825 1210 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 HUNKP57058 714 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 CLDN10P78369 228 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SDHAF4Q5VUM1 108 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 CMC1Q7Z7K0 106 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 THTPAQ9BU02 230 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 ZNF358Q9NW07 568 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 DGKIO75912 1065 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SMIM10L2AP0DMW4 78 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SMIM10L2BP0DMW5 78 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 PEX6Q13608 980 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 CDHR3Q6ZTQ4 885 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TLK2Q86UE8 772 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
DNMT3A-203ENST00000380746 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TXNDC9O14530 226 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 FGFR1P11362 822 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SOX11P35716 441 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SNX16P57768 344 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 GHRHRQ02643 423 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 HFE2Q6ZVN8 426 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 MCUQ8NE86 351 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 E2F7Q96AV8 911 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CLPTM1LQ96KA5 538 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TBC1D10AQ9BXI6 508 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 ACSS3Q9H6R3 686 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CAB39LQ9H9S4 337 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 NOP53Q9NZM5 478 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 ITGA11Q9UKX5 1188 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 MCM3APO60318 1980 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SMIM28A0A1B0GU29 152 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 RNF103O00237 685 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SCAMP3O14828 347 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 DNAJC6O75061 913 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 MT-CO1P00395 513 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TAF6P49848 677 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 HDAC4P56524 1084 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms