RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 NDST1P52848 882 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ITGA9Q13797 1035 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ZNF284Q2VY69 593 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ZNF280DQ6N043 979 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 OSMRQ99650 979 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 SYT15Q9BQS2 421 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 USE1Q9NZ43 259 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 INSRRP14616 1297 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CCR1P32246 355 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 NME5P56597 212 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CDC16Q13042 620 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CCDC92Q53HC0 331 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 UCMAQ8WVF2 138 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 FAM136AQ96C01 138 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 KLHL4Q9C0H6 718 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 SPATC1LQ9H0A9 340 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 HPS4Q9NQG7 708 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 TMCC3Q9ULS5 477 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 SLIT1O75093 1534 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ZCCHC18P0CG32 403 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 PECAM1P16284 738 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 TMED10P49755 219 aaKnown RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ILF2Q12905 390 aaKnown RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 AGKQ53H12 422 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 KYQ8NBH2 561 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CAB39Q9Y376 341 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 LZTS3O60299 673 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CASP7P55210 303 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ZNF844Q08AG5 666 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CRYMQ14894 314 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 TMPRSS6Q8IU80 811 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 C10orf88Q9H8K7 445 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 CACNA2D2Q9NY47 1150 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 UBP1Q9NZI7 540 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 PPP2R3BQ9Y5P8 575 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
COL2A1-202ENST00000380518 DSG3P32926 999 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 GPC1P35052 558 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 CAMK2GQ13555 558 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 CCDC153Q494R4 210 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 N4BP2L1Q5TBK1 243 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ZBTB49Q6ZSB9 765 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 SERPINF2P08697 491 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 RRM2P31350 389 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 NBPF12Q5TAG4 269 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 MFSD7Q6UXD7 560 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 BRSK2Q8IWQ3 736 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 CASP10Q92851 521 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PPP1R10Q96QC0 940 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ADARB2Q9NS39 739 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DDX43Q9NXZ2 648 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 A0A1B0GW55 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 RASSF9O75901 435 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PAEPP09466 180 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L2P0CJ85 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L3P0CJ86 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L4P0CJ87 422 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L5P0CJ88 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L6P0CJ89 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4L7P0CJ90 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 RAD23AP54725 363 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ELAVL2Q12926 359 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 KRT78Q8N1N4 520 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DDHD1Q8NEL9 900 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 TCP10LQ8TDR4 215 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 HTR3CQ8WXA8 447 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PGM2Q96G03 612 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DUX4Q9UBX2 424 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 POLG2Q9UHN1 485 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 STRNO43815 780 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 TRIM13O60858 407 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 CAPZA2P47755 286 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 NR2C2P49116 596 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PRKAA2P54646 552 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 TBL3Q12788 808 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ERAP2Q6P179 960 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 DEFB107AQ8IZN7 70 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 PCSK9Q8NBP7 692 aaKnown RBP16.47■□□□□ 0.23
COL2A1-202ENST00000380518 HDAC7Q8WUI4 952 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 ELOVL6Q9H5J4 265 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 NINJ2Q9NZG7 142 aa16.47■□□□□ 0.23
COL2A1-202ENST00000380518 A0A087X0B3 334 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 MGAT4DA6NG13 374 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ACKR2O00590 384 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 DDHD2O94830 711 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms