RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TRIM56Q9BRZ2 755 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF670Q9BS34 389 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PHACTR1Q9C0D0 580 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ACTR5Q9H9F9 607 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 HAUS2Q9NVX0 235 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PRKAG3Q9UGI9 489 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 C17orf102A2RUQ5 167 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 METTL18O95568 372 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 ZBED1O96006 694 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 AMPD1P23109 780 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CPT1AP50416 773 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 ADIGQ0VDE8 80 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 RASA2Q15283 850 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 DPYSL2Q16555 572 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 KBTBD12Q3ZCT8 623 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 WSCD1Q658N2 575 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CAND1Q86VP6 1230 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM131BQ86XD5 332 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 B3GALNT2Q8NCR0 500 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 WNT8BQ93098 351 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 RTP4Q96DX8 246 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF560Q96MR9 790 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 PLAC1Q9HBJ0 212 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 ETNK1Q9HBU6 452 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC40A1Q9NP59 571 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC12A4Q9UP95 1085 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CHADO15335 359 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 HUS1O60921 280 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 RASSF9O75901 435 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM155BO75949 473 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 UBOX5O94941 541 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 C1QAP02745 245 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 APRTP07741 180 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 GHRP10912 638 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 GOT1P17174 413 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CTGFP29279 349 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 YWHAZP63104 245 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 IL9RQ01113 521 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 MTFR1Q15390 333 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FSCN1Q16658 493 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 OTUD1Q5VV17 481 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SDR16C5Q8N3Y7 309 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CSPG4P5Q96PW8 444 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 AP5M1Q9H0R1 490 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 PAK5Q9P286 719 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 TSC2P49815 1807 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SYNJ2BP-COX16A0A087WUM0 186 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 F5H423 210 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CYB561D2O14569 222 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 GRIA1P42261 906 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 MSH2P43246 934 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 YWHAGP61981 247 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SPARCL1Q14515 664 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SV2CQ496J9 727 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 LVRNQ6Q4G3 990 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FITM2Q8N6M3 262 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 GSTCDQ8NEC7 633 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 TRPV1Q8NER1 839 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM149B1Q96BN6 582 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 CFAP36Q96G28 342 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 PITPNM3Q9BZ71 974 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 COX16Q9P0S2 106 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SENP1Q9P0U3 644 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 FETUBQ9UGM5 382 aa8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 TIMM13Q9Y5L4 95 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-204ENST00000380176 SMAPO00193 183 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SUN1O94901 812 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 RARBP10826 455 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ADRA1DP25100 572 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 HOXC8P31273 242 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 RDXP35241 583 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PNPLA4P41247 253 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC18A1P54219 525 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SNX16P57768 344 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 KLHL38Q2WGJ6 581 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 DCAF6Q58WW2 860 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SYPL2Q5VXT5 272 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 NCBP2-AS2Q69YL0 99 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 KCNT2Q6UVM3 1135 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 C17orf99Q6UX52 265 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CTU1Q7Z7A3 348 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 RASAL3Q86YV0 1011 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CCDC63Q8NA47 563 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 LPPQ93052 612 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 HSFY1Q96LI6 401 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PPP1R10Q96QC0 940 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 TMEM30AQ9NV96 361 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 MIOSQ9NXC5 875 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 DTLQ9NZJ0 730 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC17A7Q9P2U7 560 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms