RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RAD51BO15315 384 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 VAC14Q08AM6 782 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 SETMARQ53H47 684 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 NARFQ9UHQ1 456 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 MRTO4Q9UKD2 239 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 RBP3P10745 1247 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 TMEM26Q6ZUK4 368 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM71DQ8N9W8 422 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 UXTQ9UBK9 157 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 IL12RB1P42701 662 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 SEL1L3Q68CR1 1132 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 IL1RAPL1Q9NZN1 696 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 OR6B1O95007 311 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 GUF1Q8N442 669 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ASNA1O43681 348 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 RPS6KA4O75676 772 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 FBXO21O94952 628 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 TRMT11Q7Z4G4 463 aaKnown RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF677Q86XU0 584 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 LEMD2Q8NC56 503 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 BSNDQ8WZ55 320 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 DGKIO75912 1065 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 TMEM62Q0P6H9 643 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 R3HCC1LQ7Z5L2 792 aaKnown RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 OMDQ99983 421 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 DSN1Q9H410 356 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 SOHLH2Q9NX45 425 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM153AQ9UHL3 310 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 MED26O95402 600 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 CTXN3Q4LDR2 81 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 ARSJQ5FYB0 599 aaPredicted RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 XRRA1Q6P2D8 792 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 ADGRL3Q9HAR2 1447 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 ANXA6P08133 673 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 DDI2Q5TDH0 399 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM171BQ6P995 826 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 ULK3Q6PHR2 472 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 SPATA21Q7Z572 469 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 UTP15Q8TED0 518 aaKnown RBP11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 IDI2Q9BXS1 227 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.56
PTCHD1-201ENST00000379361 EYA4O95677 639 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 POLR2EP19388 210 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 BOLA3Q53S33 107 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 EPN2O95208 641 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 HSD3B2P26439 372 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 POLR2LP62875 67 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 UBE2E3Q969T4 207 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TPD52L3Q96J77 140 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 PUS7LQ9H0K6 701 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 RALGAPA1Q6GYQ0 2036 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 MAGEB3O15480 346 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TSPAN19P0C672 248 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CYP2B6P20813 491 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 GPAT2Q6NUI2 795 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ADGRF2Q8IZF7 708 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP10BO94823 1461 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CACNA1IQ9P0X4 2223 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ABCB1P08183 1280 aaPredicted RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CHN1P15882 459 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 BCAT1P54687 386 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 FAM20CQ8IXL6 584 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF557Q8N988 423 aaPredicted RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CPA5Q8WXQ8 436 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 DUSP12Q9UNI6 340 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CCNA2P20248 432 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ACOT2P49753 483 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNHIT3Q15649 155 aaPredicted RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP13A4Q4VNC1 1196 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 SCARA3Q6AZY7 606 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM159Q96B96 161 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM117Q9H0C3 514 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM8AQ9HCN3 771 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TIMM44O43615 452 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 RGS20O76081 388 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 CYP2D6P10635 497 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ARL3P36405 182 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 SVOPQ8N4V2 548 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 KLHL23Q8NBE8 558 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TEX33O43247 280 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 IGFALSP35858 605 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 ZSWIM7Q19AV6 140 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 PAN2Q504Q3 1202 aaKnown RBP11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 HAVCR1Q96D42 359 aa11.52□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM47Q9BQJ4 181 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms