RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RAB6CQ9H0N0 254 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 DHX35Q9H5Z1 703 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 USP29Q9HBJ7 922 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 KCNK9Q9NPC2 374 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 GPATCH2LQ9NWQ4 482 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CTNNAL1Q9UBT7 734 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 DDX20Q9UHI6 824 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 GOLGA6L7A0A1B0GV03 622 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ARHGEF37A1IGU5 675 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 RASA4BC9J798 803 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 KCNN4O15554 427 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PRPF4O43172 522 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 RASA4O43374 803 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ADAMTS4O75173 837 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 TMEM63AO94886 807 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CHRNA1P02708 482 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GSTA2P09210 222 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 COL6A1P12109 1028 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GCAP28676 217 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PCSK1P29120 753 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 MLH1P40692 756 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 MAGEA9P43362 315 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 YWHAZP63104 245 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ADIGQ0VDE8 80 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FASTKD3Q14CZ7 662 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CA9Q16790 459 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SLC45A4Q5BKX6 768 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 WSCD1Q658N2 575 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 DSTYKQ6XUX3 929 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CLEC20AQ6ZU45 233 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 BNIPLQ7Z465 357 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SRRM1Q8IYB3 904 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 DEFB106AQ8N104 65 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CCDC197Q8NCU1 140 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 MCUQ8NE86 351 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FBXO36Q8NEA4 188 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CKAP2Q8WWK9 683 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 NT5C3BQ969T7 300 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 LRRC39Q96DD0 335 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PGBD4Q96DM1 585 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ZFP42Q96MM3 310 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 QKIQ96PU8 341 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FERMT1Q9BQL6 677 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 RABGEF1Q9UJ41 708 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FZD10Q9ULW2 581 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CLUHO75153 1309 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM47DPA6NHR8 397 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 C9IYK1 514 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 POC1B-GALNT4F8VUJ3 575 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 H3BRJ5 948 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GOLGA8MH3BSY2 632 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GCATO75600 419 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CABYRO75952 493 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PGK1P00558 417 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ODC1P11926 461 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 TPSB2P20231 275 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ZNF135P52742 658 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GPX6P59796 221 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 TPSAB1Q15661 275 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 BBS9Q3SYG4 887 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 MDH1BQ5I0G3 518 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FNBP1LQ5T0N5 605 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM109BQ6ICB4 259 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CCDC121Q6ZUS5 278 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PIGWQ7Z7B1 504 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ANKMY2Q8IV38 441 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 LRRC34Q8IZ02 419 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CYP4X1Q8N118 509 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CNPY4Q8N129 248 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PCSK9Q8NBP7 692 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM149B1Q96BN6 582 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ALKBH8Q96BT7 664 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 MAGEB18Q96M61 343 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 UROC1Q96N76 676 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CSPG4P5Q96PW8 444 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 SMC6Q96SB8 1091 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 GAD1Q99259 594 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CYTH2Q99418 400 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 NPY6RQ99463 290 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CDX2Q99626 313 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PLCD4Q9BRC7 762 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 DHRS4Q9BTZ2 278 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms