RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 INSL5Q9Y5Q6 135 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 SYNJ2BP-COX16A0A087WUM0 186 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 ZDHHC11BP0C7U3 371 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 MCM3P25205 808 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 FNTAP49354 379 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 CXCR3P49682 368 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 PITX1P78337 314 aaPredicted RBP25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 NNTQ13423 1086 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 ELF2Q15723 593 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 BRMS1LQ5PSV4 323 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 MAATS1Q7Z4T9 603 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 ADAT2Q7Z6V5 191 aaKnown RBP25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 ZNF276Q8N554 614 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 TTC13Q8NBP0 860 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 HEMGNQ9BXL5 484 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 WDR6Q9NNW5 1121 aaKnown RBP25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 COX16Q9P0S2 106 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 CALCOCO1Q9P1Z2 691 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 FBXW11Q9UKB1 542 aa25.53■■□□□ 1.68
ECHDC3-201ENST00000379215 IRAK2O43187 625 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 KLRC2P26717 231 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 ATXN1P54253 815 aaKnown RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 ERVK-21P61565 698 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 DPYSL3Q14195 570 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 KLHL7Q8IXQ5 586 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 TNS4Q8IZW8 715 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 CCDC185Q8N715 623 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 PRELID2Q8N945 189 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 MAGOHBQ96A72 148 aaKnown RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 DHX35Q9H5Z1 703 aaKnown RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 WDCPQ9H6R7 721 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 LRRC19Q9H756 370 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 PCDH18Q9HCL0 1135 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 MAGED2Q9UNF1 606 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 MYO16Q9Y6X6 1858 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 C2orf71A6NGG8 1288 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 TGM5O43548 720 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 ERVFC1P60507 584 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 TWF1Q12792 350 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 MTMR3Q13615 1198 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 DHX34Q14147 1143 aaKnown RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 SIX1Q15475 284 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 RAB30Q15771 203 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 SNX30Q5VWJ9 437 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 PLPP4Q5VZY2 271 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 KAZNQ674X7 775 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 BBS12Q6ZW61 710 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 STKLD1Q8NE28 680 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 ADAM32Q8TC27 787 aa25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 FEZ2Q9UHY8 353 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-201ENST00000379215 PLXNA4Q9HCM2 1894 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 GRXCR1A8MXD5 290 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 GLUD1P00367 558 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 SLC2A3P11169 496 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 RARGP13631 454 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 MYOGP15173 224 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 ADRA1BP35368 520 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 ARL4AP40617 200 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 MTA1Q13330 715 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 EIF4EBP2Q13542 120 aaPredicted RBP25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 CCNG2Q16589 344 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 LILRA6Q6PI73 481 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 RNF34Q969K3 372 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 GDF15Q99988 308 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 DDX47Q9H0S4 455 aaKnown RBP25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 MSRAQ9UJ68 235 aa25.51■■□□□ 1.67
ECHDC3-201ENST00000379215 TCRBV7S2A1N4TA0A589 114 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 RHOXF2BP0C7M4 288 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 KRT10P13645 584 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 ZFXP17010 805 aaPredicted RBP25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 L1CAMP32004 1257 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 CCR1P32246 355 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 KPNA1P52294 538 aaPredicted RBP25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 PPP2R5DQ14738 602 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 ZC3H12AQ5D1E8 599 aaKnown RBP25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 FAM109BQ6ICB4 259 aaPredicted RBP25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 RFX6Q8HWS3 928 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 MICAL1Q8TDZ2 1067 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 PSMG2Q969U7 264 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 FAF2Q96CS3 445 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 ZNF512Q96ME7 567 aaPredicted RBP25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 RHOXF2Q9BQY4 288 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 OSER1Q9NX31 292 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 PCYOX1Q9UHG3 505 aa25.5■■□□□ 1.67
ECHDC3-201ENST00000379215 CD48P09326 243 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 HMGA1P17096 107 aaKnown RBP25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 TUBP50607 506 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 PPP6R3Q5H9R7 873 aaPredicted RBP25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 ANKS1BQ7Z6G8 1248 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 CASP10Q92851 521 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 RNF157Q96PX1 679 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 LRRC1Q9BTT6 524 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 GPATCH2LQ9NWQ4 482 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 TRPM5Q9NZQ8 1165 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 TLR6Q9Y2C9 796 aa25.49■■□□□ 1.67
ECHDC3-201ENST00000379215 NR2E1Q9Y466 385 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms