RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CHN1P15882 459 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 BDNFP23560 247 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 RANBP1P43487 201 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 GLRBP48167 497 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 DDR1Q08345 913 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
LINC00654-201ENST00000379053 SETMARQ53H47 684 aaPredicted RBP11.24□□□□□ -0.61
LINC00654-201ENST00000379053 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 TEX9Q8N6V9 391 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 MCOLN3Q8TDD5 553 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 EME1Q96AY2 570 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 APBA2Q99767 749 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 AASDHPPTQ9NRN7 309 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 TRPC4Q9UBN4 977 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 ZMYM2Q9UBW7 1377 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 BMP10O95393 424 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 RPN2P04844 631 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 ADH1AP07327 375 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 PDHA1P08559 390 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 SERPINB8P50452 374 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 YWHAZP63104 245 aaKnown RBP11.24□□□□□ -0.61
LINC00654-201ENST00000379053 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
LINC00654-201ENST00000379053 GPAMQ9HCL2 828 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 CYP4F12Q9HCS2 524 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 AHSPQ9NZD4 102 aa11.24□□□□□ -0.61
LINC00654-201ENST00000379053 LACTBL1A8MY62 500 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ADCY6O43306 1168 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RAD51CO43502 376 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 WDR47O94967 919 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SLC2A14Q8TDB8 520 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RUBCNQ92622 972 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 NRCAMQ92823 1304 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 QRICH2Q9H0J4 1663 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 LOC100653049A0A140TA62 436 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 KRT34O76011 436 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 FGBP02675 491 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 MLH1P40692 756 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SKP1P63208 163 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 C16orf72Q14CZ0 275 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CNGA3Q16281 694 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 INAVAQ3KP66 663 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 FUT11Q495W5 492 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 VN1R5Q7Z5H4 357 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ADGRA1Q86SQ6 560 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SETD3Q86TU7 594 aaPredicted RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 LRRC6Q86X45 466 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CASP10Q92851 521 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 PPP1R14AQ96A00 147 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SMAD5Q99717 465 aaKnown RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ILKAPQ9H0C8 392 aaPredicted RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 BLOC1S6Q9UL45 172 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SALL1Q9NSC2 1324 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 HMGCRP04035 888 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 AMD1P17707 334 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 PAX3P23760 479 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RRM1P23921 792 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CYP2F1P24903 491 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RIOX2Q8IUF8 465 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ERGIC2Q96RQ1 377 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CTNNAL1Q9UBT7 734 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RECQL4O94761 1208 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 TOMM20Q15388 145 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 NFIL3Q16649 462 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RBM23Q86U06 439 aaKnown RBP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 TRIM69Q86WT6 500 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ZDHHC6Q9H6R6 413 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SOHLH2Q9NX45 425 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 NUDT14O95848 222 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RAD23BP54727 409 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 FOXR1Q6PIV2 292 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 MIER2Q8N344 545 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ADAM32Q8TC27 787 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 ATG4AQ8WYN0 398 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
LINC00654-201ENST00000379053 OR56A5P0C7T3 313 aa11.22□□□□□ -0.61
LINC00654-201ENST00000379053 ZNF7P17097 686 aaPredicted RBP11.22□□□□□ -0.61
LINC00654-201ENST00000379053 RUNX1T1Q06455 604 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms