RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C1orf127Q8N9H9 656 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 SRPK1Q96SB4 655 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 MECRQ9BV79 373 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ELOVL4Q9GZR5 314 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 RSAD1Q9HA92 442 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 A6NJR5 290 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 FAM155BO75949 473 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 NFICP08651 508 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 SH3BGRP55822 239 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 C1orf228Q6PIY5 440 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 GSTCDQ8NEC7 633 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC44A1Q8WWI5 657 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 FAF2Q96CS3 445 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 RILPQ96NA2 401 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 PLEKHG4BQ96PX9 1271 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 BCO2Q9BYV7 579 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 SUDS3Q9H7L9 328 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 RPF1Q9H9Y2 349 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 TEX264Q9Y6I9 313 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 H7C0C1 242 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 M0QYV0 167 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 ACKR2O00590 384 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 ATP5OP48047 213 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 AQP5P55064 265 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 BST1Q10588 318 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 MCRS1Q96EZ8 462 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 HIC2Q96JB3 615 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 C7orf26Q96N11 449 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 CCDC106Q9BWC9 280 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 S100A14Q9HCY8 104 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 ASNSD1Q9NWL6 643 aa17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 MARCOQ9UEW3 520 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-201ENST00000378133 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ARIH2O95376 493 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 PENKP01210 267 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ITGB3P05106 788 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 SCNN1BP51168 640 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ARHGAP8P85298 464 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ASPHQ12797 758 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CDO1Q16878 200 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ATG16L1Q676U5 607 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 SPATA24Q86W54 205 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 FAM172AQ8WUF8 416 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 PYDC1Q8WXC3 89 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 E2F7Q96AV8 911 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CFAP36Q96G28 342 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 TMEM176AQ96HP8 235 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ZNF395Q9H8N7 513 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 RAB6BQ9NRW1 208 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 GRAP2O75791 330 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 MAP3K6O95382 1288 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CCNFP41002 786 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 GPD2P43304 727 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 MAP7Q14244 749 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 NOMO1Q15155 1222 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 AAGABQ6PD74 315 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 KYAT3Q6YP21 454 aaKnown RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ADGRG6Q86SQ4 1221 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 DHDDSQ86SQ9 333 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 TRIM42Q8IWZ5 723 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CTAGE3PQ8IX95 158 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 HEXIM2Q96MH2 286 aaKnown RBP17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 CDT1Q9H211 546 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 ZDHHC7Q9NXF8 308 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 TMCO1Q9UM00 188 aa17.18■□□□□ 0.34
PCDHA1-201ENST00000378133 IQCF3P0C7M6 154 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 UQCRBP14927 111 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 TSHRP16473 764 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 EDNRBP24530 442 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 GRIA2P42262 883 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 HIC1Q14526 733 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 KCNJ11Q14654 390 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 SFT2D3Q587I9 215 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 LPCAT4Q643R3 524 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 TRNP1Q6NT89 227 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 LCA5Q86VQ0 697 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 LRRN4Q8WUT4 740 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 FAM167AQ96KS9 214 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 C1orf21Q9H246 121 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 FZD8Q9H461 694 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 A0A088AWK7 358 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 CCDC195A0A1B0GUA6 201 aa17.17■□□□□ 0.34
PCDHA1-201ENST00000378133 LACTBL1A8MY62 500 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms