RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 SH3TC2Q8TF17 1288 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
BEST1-201ENST00000378043 EBNA1BP2Q99848 306 aaKnown RBP11.32□□□□□ -0.6
BEST1-201ENST00000378043 DPEP3Q9H4B8 488 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 RNF19AQ9NV58 838 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 SBF1O95248 1867 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 RALGAPA2Q2PPJ7 1873 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 E7ENQ6 273 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 FCHO1O14526 889 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 GRM5P41594 1212 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
BEST1-201ENST00000378043 OCRLQ01968 901 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 ZBTB16Q05516 673 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 TAF11Q15544 211 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 TEX44Q53QW1 395 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 KCNT2Q6UVM3 1135 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 UNC5BQ8IZJ1 945 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 CENPIQ92674 756 aaPredicted RBP11.32□□□□□ -0.6
BEST1-201ENST00000378043 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
BEST1-201ENST00000378043 MROH8Q9H579 483 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 BATF3Q9NR55 127 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 MKS1Q9NXB0 559 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
BEST1-201ENST00000378043 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
BEST1-201ENST00000378043 ZBTB6Q15916 424 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 SOWAHAQ2M3V2 549 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 MROH9Q5TGP6 573 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 GSDMBQ8TAX9 411 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 C18orf25Q96B23 403 aaPredicted RBP11.31□□□□□ -0.6
BEST1-201ENST00000378043 C7orf26Q96N11 449 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 DHX35Q9H5Z1 703 aaKnown RBP11.31□□□□□ -0.6
BEST1-201ENST00000378043 DCLRE1BQ9H816 532 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 GTF2IRD1Q9UHL9 959 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 MAD1L1Q9Y6D9 718 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 CAPN14A8MX76 684 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 GYG2O15488 501 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 GSRP00390 522 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 SETSIPP0DME0 302 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 RARBP10826 455 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 TPSB2P20231 275 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 PTPN9P43378 593 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 TPSAB1Q15661 275 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 CHI3L2Q15782 390 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 ACSBG2Q5FVE4 666 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 FAM91A1Q658Y4 838 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
BEST1-201ENST00000378043 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
BEST1-201ENST00000378043 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 ADGRF2Q8IZF7 708 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 CCDC185Q8N715 623 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 FBXO27Q8NI29 283 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 PPTC7Q8NI37 304 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 E2F7Q96AV8 911 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 DCPSQ96C86 337 aaKnown RBP11.31□□□□□ -0.6
BEST1-201ENST00000378043 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 PCMTD2Q9NV79 361 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 HES2Q9Y543 173 aa11.31□□□□□ -0.6
BEST1-201ENST00000378043 CCDC195A0A1B0GUA6 201 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 ASB14A6NK59 587 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 H3BRB1 525 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 GSTA2P09210 222 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 ADORA2AP29274 412 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 TMPRSS15P98073 1019 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 LGSNQ5TDP6 509 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 SLC26A9Q7LBE3 791 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 NDUFAF2Q8N183 169 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 TUBB6Q9BUF5 446 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 KCNK4Q9NYG8 393 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 AP4E1Q9UPM8 1137 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 PDCD11Q14690 1871 aaKnown RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
BEST1-201ENST00000378043 KRT38O76015 456 aa11.3□□□□□ -0.6
BEST1-201ENST00000378043 NPTXRO95502 500 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms