RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 C3orf20Q8ND61 904 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 PPHLN1Q8NEY8 458 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MYCBPAPQ8TBZ2 947 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 TTC17Q96AE7 1141 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ZNF669Q96BR6 464 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MYOCQ99972 504 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MPP6Q9NZW5 540 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 NDRG2Q9UN36 371 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 FAM50BQ9Y247 325 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 STXBP5LQ9Y2K9 1186 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 CACNA1GO43497 2377 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 A0A1W2PRU2 124 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC9A3R1O14745 358 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 TBL1XO60907 577 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 KRT38O76015 456 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ATG7O95352 703 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CHRNA1P02708 482 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC5A3P53794 718 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ATXN3P54252 364 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 VCPP55072 806 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 C12orf56Q8IXR9 622 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 TDRD5Q8NAT2 981 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SCAMP5Q8TAC9 235 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 LRRC8CQ8TDW0 803 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 UBXN6Q9BZV1 441 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ST6GALNAC4Q9H4F1 302 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 INTS9Q9NV88 658 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 INTUQ9ULD6 942 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 GNEQ9Y223 722 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 NEDD8-MDP1E9PL57 170 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 EBAG9O00559 213 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 HCRTO43612 131 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SNX2O60749 519 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PDK2Q15119 407 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PTRHD1Q6GMV3 140 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PDZD8Q8NEN9 1154 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 THOC1Q96FV9 657 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 DCLK3Q9C098 648 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC7A5P2Q9GIP4 190 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 OSGEPL1Q9H4B0 414 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 FBXL5Q9UKA1 691 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 DERAQ9Y315 318 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CCDC88AQ3V6T2 1871 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 O00370 1275 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 TPH1P17752 444 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CHRM3P20309 590 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CDC25CP30307 473 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 NOVP48745 357 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 FMO1Q01740 532 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CUL1Q13616 776 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 KCTD19Q17RG1 926 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ALS2CLQ60I27 953 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 VSTM1Q6UX27 236 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CHRDL2Q6WN34 429 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 C12orf76Q8N812 135 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 KLHL23Q8NBE8 558 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SPATA20Q8TB22 786 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CPXM1Q96SM3 734 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 TBCBQ99426 244 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RAD9AQ99638 391 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CARD9Q9H257 536 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 C20orf96Q9NUD7 363 aaPredicted RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PAK5Q9P286 719 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 NEU2Q9Y3R4 380 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RWDD3Q9Y3V2 267 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ASXL3Q9C0F0 2248 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CFAP69A5D8W1 941 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RASA4BC9J798 803 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 MTSS1O43312 755 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RASA4O43374 803 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 USP12O75317 370 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 DDHD2O94830 711 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SERPIND1P05546 499 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CA3P07451 260 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RARAP10276 462 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CYP4F8P98187 520 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RAB30Q15771 203 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 FASTKD1Q53R41 847 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PMF1Q6P1K2 205 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RFWD3Q6PCD5 774 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 PRR23CQ6ZRP0 262 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 CCDC121Q6ZUS5 278 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 NT5DC3Q86UY8 548 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 FAM124AQ86V42 546 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ZDHHC17Q8IUH5 632 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 ULK4Q96C45 1275 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 SPATA17Q96L03 361 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 MIR1-1HGQ9H1L0 117 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 NRDE2Q9H7Z3 1164 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 RRN3Q9NYV6 651 aa8.74□□□□□ -1.01
CRNKL1-202ENST00000377340 IQANK1A0A1B0GTG1 560 aa8.73□□□□□ -1.01
CRNKL1-202ENST00000377340 CILPO75339 1184 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms