RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRIM49BA6NDI0 452 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 KLKB1P03952 638 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 CORO1AP31146 461 aaKnown RBP22.07■■□□□ 1.12
VSX1-201ENST00000376707 CHKAP35790 457 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 PTGER3P43115 390 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 TKTL1P51854 596 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 YWHAGP61981 247 aaKnown RBP eCLIP22.07■■□□□ 1.12
VSX1-201ENST00000376707 STIM1Q13586 685 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 SPDYCQ5MJ68 293 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 N4BP2L1Q5TBK1 243 aaPredicted RBP22.07■■□□□ 1.12
VSX1-201ENST00000376707 TMEM9BQ9NQ34 198 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 MARCH2Q9P0N8 246 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 CALCOCO1Q9P1Z2 691 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 HESX1Q9UBX0 185 aa22.07■■□□□ 1.12
VSX1-201ENST00000376707 ABCA7Q8IZY2 2146 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 PSMA7O14818 248 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 KCNK5O95279 499 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 ZBED1O96006 694 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 CISD3P0C7P0 127 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 CD19P15391 556 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 BCAT1P54687 386 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 LRMPQ12912 555 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 SGO2Q562F6 1265 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 LYSMD4Q5XG99 296 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 SLC36A4Q6YBV0 504 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 SYT12Q8IV01 421 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 IPO4Q8TEX9 1081 aaKnown RBP22.06■■□□□ 1.12
VSX1-201ENST00000376707 SLC35C1Q96A29 364 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 DHTKD1Q96HY7 919 aaPredicted RBP22.06■■□□□ 1.12
VSX1-201ENST00000376707 ULBP1Q9BZM6 244 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 TSPAN16Q9UKR8 245 aa22.06■■□□□ 1.12
VSX1-201ENST00000376707 THADAQ6YHU6 1953 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 SLC12A8A0AV02 714 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 XPO1O14980 1071 aaKnown RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 AP5Z1O43299 807 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 PENKP01210 267 aaPredicted RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 PPP1R2P41236 205 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 DPP6P42658 865 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 IRX4P78413 519 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 RPL6Q02878 288 aaKnown RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 PDE4CQ08493 712 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 TRIM61Q5EBN2 209 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 PSAPL1Q6NUJ1 521 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 DENND1CQ8IV53 801 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 ERLEC1Q96DZ1 483 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 GABRG3Q99928 467 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 NUSAP1Q9BXS6 441 aaKnown RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 LRRC4Q9HBW1 653 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 METTL14Q9HCE5 456 aaKnown RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 CACNA2D2Q9NY47 1150 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 EVLQ9UI08 416 aaPredicted RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 FBXO10Q9UK96 956 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 MAN1B1Q9UKM7 699 aa22.05■■□□□ 1.12
VSX1-201ENST00000376707 AGO1Q9UL18 857 aaKnown RBP22.05■■□□□ 1.12
VSX1-201ENST00000376707 TULP2O00295 520 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 GFRA2O00451 464 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 ZNF217O75362 1048 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 CYBBP04839 570 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 NDUFV2P19404 249 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 TBXAS1P24557 533 aaPredicted RBP22.04■■□□□ 1.12
VSX1-201ENST00000376707 BST2Q10589 180 aaKnown RBP22.04■■□□□ 1.12
VSX1-201ENST00000376707 LMAN2Q12907 356 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 FYB2Q5VWT5 728 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 PM20D1Q6GTS8 502 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 ISM2Q6H9L7 571 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 KIAA1211LQ6NV74 962 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 FOXR2Q6PJQ5 311 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
VSX1-201ENST00000376707 ANGPTL2Q9UKU9 493 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 SLC27A6Q9Y2P4 619 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 RAD54BQ9Y620 910 aa22.04■■□□□ 1.12
VSX1-201ENST00000376707 ATXN2Q99700 1313 aaKnown RBP22.04■■□□□ 1.12
VSX1-201ENST00000376707 VDRP11473 427 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 CD44P16070 742 aaKnown RBP22.03■■□□□ 1.12
VSX1-201ENST00000376707 NOVA1P51513 510 aaKnown RBP22.03■■□□□ 1.12
VSX1-201ENST00000376707 NDRG1Q92597 394 aaKnown RBP22.03■■□□□ 1.12
VSX1-201ENST00000376707 PLD4Q96BZ4 506 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 P2RY11Q96G91 374 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 CD248Q9HCU0 757 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 OLA1Q9NTK5 396 aaKnown RBP22.03■■□□□ 1.12
VSX1-201ENST00000376707 TMEM74BQ9NUR3 256 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 KIAA1257Q9ULG3 409 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 CYP8B1Q9UNU6 501 aa22.03■■□□□ 1.12
VSX1-201ENST00000376707 CDX4O14627 284 aaPredicted RBP22.02■■□□□ 1.12
VSX1-201ENST00000376707 GADD45BO75293 160 aaPredicted RBP22.02■■□□□ 1.12
VSX1-201ENST00000376707 BMP6P22004 513 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 ITPKAP23677 461 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 PMLP29590 882 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 FMO5P49326 533 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 MFAP3P55082 362 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 ADIGQ0VDE8 80 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 UAP1L1Q3KQV9 507 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 CCDC40Q4G0X9 1142 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 SIX6OS1Q8N1H7 587 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 DEFB119Q8N690 84 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 UBA3Q8TBC4 463 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 RNF139Q8WU17 664 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 CEP63Q96MT8 703 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 PILRBQ9UKJ0 227 aa22.02■■□□□ 1.12
VSX1-201ENST00000376707 NUP205Q92621 2012 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms