RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 C2orf71A6NGG8 1288 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 A8MXQ7 604 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 PIK3R2O00459 728 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 TSPAN1O60635 241 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 GRAP2O75791 330 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 KRT38O76015 456 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 BPGMP07738 259 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 TXNP10599 105 aaKnown RBP11.05□□□□□ -0.64
ABCF1-202ENST00000376545 CYP2F1P24903 491 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 CNTFP26441 200 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 SDC4P31431 198 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 ZBTB6Q15916 424 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 ARHGAP17Q68EM7 881 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 NRG4Q8WWG1 115 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 MECRQ9BV79 373 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 CCDC106Q9BWC9 280 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 C20orf27Q9GZN8 174 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 HEY1Q9Y5J3 304 aa11.05□□□□□ -0.64
ABCF1-202ENST00000376545 DGKIO75912 1065 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 APRTP07741 180 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ESRRAP11474 423 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 GRM5P41594 1212 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 PRKG1Q13976 671 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TRMT10BQ6PF06 316 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ALYREFQ86V81 257 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ADGRF2Q8IZF7 708 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 WDR60Q8WVS4 1066 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ACAP3Q96P50 834 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 OLFM3Q96PB7 478 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 STX18Q9P2W9 335 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 F8W8V4 182 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 CXCL11O14625 94 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 CSDE1O75534 798 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 PSMG1O95456 288 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 MLNP12872 115 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 PAX7P23759 505 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 VHLP40337 213 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TTLL4Q14679 1199 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 KPNB1Q14974 876 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 FAM182AQ5T1J6 154 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 FAXCQ5TGI0 409 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 GPC2Q8N158 579 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 MPP5Q8N3R9 675 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 MMP19Q99542 508 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 IQCGQ9H095 443 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 PLEKHA5Q9HAU0 1116 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TSC2P49815 1807 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ZNF236Q9UL36 1845 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 LGALS2P05162 132 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TFE3P19532 575 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 BAG6P46379 1132 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 RGS7P49802 495 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 SLC34A1Q06495 639 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 NIPAL4Q0D2K0 466 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 WASHC5Q12768 1159 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 TBCCQ15814 346 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 MARK2Q7KZI7 788 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 SLC26A9Q7LBE3 791 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 CTAGE3PQ8IX95 158 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 ACMSDQ8TDX5 336 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 DNAJC9Q8WXX5 260 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 SIKE1Q9BRV8 207 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 NGRNQ9NPE2 291 aaKnown RBP11.04□□□□□ -0.64
ABCF1-202ENST00000376545 NMRK1Q9NWW6 199 aa11.04□□□□□ -0.64
ABCF1-202ENST00000376545 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
ABCF1-202ENST00000376545 CCDC189A1A4V9 331 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 I3L4J1 428 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 CAPN15O75808 1086 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 CDC25CP30307 473 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 GBE1Q04446 702 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 ZBTB16Q05516 673 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 CHI3L2Q15782 390 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 SCYL2Q6P3W7 929 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 KYAT3Q6YP21 454 aaKnown RBP11.03□□□□□ -0.64
ABCF1-202ENST00000376545 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
ABCF1-202ENST00000376545 UNC93AQ86WB7 457 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 STKLD1Q8NE28 680 aa11.03□□□□□ -0.64
ABCF1-202ENST00000376545 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms