RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 SEC23AQ15436 765 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CLEC16AQ2KHT3 1053 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TLK2Q86UE8 772 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CCDC60Q8IWA6 550 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 LZTR1Q8N653 840 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 RIOX1Q9H6W3 641 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TRMUO75648 421 aaKnown RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 HIST1H2AGP0C0S8 130 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 HIST1H2ADP20671 130 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 LIN52Q52LA3 116 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CEP78Q5JTW2 689 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 PDPK2PQ6A1A2 396 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 USP49Q70CQ1 688 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CLNKQ7Z7G1 428 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 ACTL9Q8TC94 416 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 HIST1H2AHQ96KK5 128 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 HIST1H2AJQ99878 128 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 H2AFJQ9BTM1 129 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 AKAP7Q9P0M2 348 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 NDUFAF1Q9Y375 327 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 PDK3Q15120 406 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TRIQKQ629K1 86 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 SDE2Q6IQ49 451 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 GMCL1P1Q8NEA9 526 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 GINS2Q9Y248 185 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 FOXN3O00409 490 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 IFRD1O00458 451 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 MYBL2P10244 700 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 RTP1P59025 263 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CDO1Q16878 200 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 PID1Q7Z2X4 250 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 UBXN6Q9BZV1 441 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 ACAD9Q9H845 621 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 USP18Q9UMW8 372 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TNPO3Q9Y5L0 923 aaKnown RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 GJA8P48165 433 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 ZNF235Q14590 738 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 UBE2SQ16763 222 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 MZT2BQ6NZ67 158 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TMEM139Q8IV31 216 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TLCD1Q96CP7 247 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 SLC16A4O15374 487 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 UMPSP11172 480 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TMEM132DQ14C87 1099 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 INO80DQ53TQ3 878 aaPredicted RBP9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TCP10LQ8TDR4 215 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 COQ7Q99807 217 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 TEX13BQ9BXU2 312 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 UBR1Q8IWV7 1749 aa9.06□□□□□ -0.96
SHROOM4-202ENST00000376020 RGSL1A5PLK6 1076 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 SPDYE2BA6NHP3 402 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 CYP27B1O15528 508 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 SPDYE6P0CI01 402 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 CASP5P51878 434 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 CDH17Q12864 832 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 DCAF4L1Q3SXM0 396 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 RECQLP46063 649 aaPredicted RBP9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 SLC1A6P48664 564 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ARPC4P59998 168 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 NCALDP61601 193 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 NFIAQ12857 509 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 C4orf50Q6ZRC1 276 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ABRAQ8N0Z2 381 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 SCAIQ8N9R8 606 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 BBS2Q9BXC9 721 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 HM13Q8TCT9 377 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 BLOC1S5Q8TDH9 187 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 OTULINQ96BN8 352 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 COX4I2Q96KJ9 171 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 DUSP10Q9Y6W6 482 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 HMGCRP04035 888 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 RAG1P15918 1043 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ADSSP30520 456 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 CCT8P50990 548 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ZNF420Q8TAQ5 688 aaPredicted RBP9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 MYDGFQ969H8 173 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ITPKCQ96DU7 683 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 NSMCE2Q96MF7 247 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 ARHGEF3Q9NR81 526 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 TMED5Q9Y3A6 229 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 NDUFS3O75489 264 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 IL6P05231 212 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 MLNP12872 115 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 BCAP31P51572 246 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 MPP3Q13368 585 aa9.05□□□□□ -0.96
SHROOM4-202ENST00000376020 DNAJB7Q7Z6W7 309 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms