RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 PRAMEF12O95522 483 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 TRUB2O95900 331 aaKnown RBP18.48■□□□□ 0.55
C6orf48-204ENST00000375639 VIPR2P41587 438 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 KRT83P78385 493 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 PPP1R15BQ5SWA1 713 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 TRNP1Q6NT89 227 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 PLCD3Q8N3E9 789 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 USP13Q92995 863 aaPredicted RBP18.48■□□□□ 0.55
C6orf48-204ENST00000375639 ZNF830Q96NB3 372 aaPredicted RBP18.48■□□□□ 0.55
C6orf48-204ENST00000375639 DDX23Q9BUQ8 820 aaKnown RBP18.48■□□□□ 0.55
C6orf48-204ENST00000375639 NUP85Q9BW27 656 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 FAM204AQ9H8W3 233 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 GKN1Q9NS71 199 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 CTTNBP2NLQ9P2B4 639 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 EPS15L1Q9UBC2 864 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 INTUQ9ULD6 942 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 ARHGAP26Q9UNA1 814 aa18.48■□□□□ 0.55
C6orf48-204ENST00000375639 REXO2Q9Y3B8 237 aaKnown RBP18.48■□□□□ 0.55
C6orf48-204ENST00000375639 SYNJ2BP-COX16A0A087WUM0 186 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 C2CD4BA6NLJ0 364 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 M0QYT0 321 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 MSI1O43347 362 aaKnown RBP18.47■□□□□ 0.55
C6orf48-204ENST00000375639 HMBSP08397 361 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 IRF1P10914 325 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 GPD1P21695 349 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 WEE1P30291 646 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 SDC4P31431 198 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 SULT1E1P49888 294 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 PITX1P78337 314 aaPredicted RBP18.47■□□□□ 0.55
C6orf48-204ENST00000375639 TANGO2Q6ICL3 276 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 KIAA1328Q86T90 577 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 TAC4Q86UU9 113 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 CELF5Q8N6W0 485 aaKnown RBP18.47■□□□□ 0.55
C6orf48-204ENST00000375639 CFAP57Q96MR6 1250 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 NPY6RQ99463 290 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 KLF16Q9BXK1 252 aaPredicted RBP18.47■□□□□ 0.55
C6orf48-204ENST00000375639 SMOC2Q9H3U7 446 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 ZFP14Q9HCL3 533 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 RRN3Q9NYV6 651 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 COX16Q9P0S2 106 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 TFR2Q9UP52 801 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 CCL26Q9Y258 94 aa18.47■□□□□ 0.55
C6orf48-204ENST00000375639 TMEM191CA6NGB0 347 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 GPR37L1O60883 481 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 GBP1P32455 592 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 COG7P83436 770 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 ATP11AP98196 1134 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 NME3Q13232 169 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 SLC25A52Q3SY17 297 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 PARM1Q6UWI2 310 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 MTSS1LQ765P7 747 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 SH3RF2Q8TEC5 729 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 SERPINB11Q96P15 392 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 TBCBQ99426 244 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 KIF9Q9HAQ2 790 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 TRPV4Q9HBA0 871 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 C11orf16Q9NQ32 467 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 DDIT4Q9NX09 232 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 CFAP97Q9P2B7 532 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 PRKAG3Q9UGI9 489 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 LIMD1Q9UGP4 676 aa18.46■□□□□ 0.55
C6orf48-204ENST00000375639 HEPACAM2A8MVW5 462 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 LEFTY2O00292 366 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 TFE3P19532 575 aaPredicted RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 FCARP24071 287 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 VAV2P52735 878 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 TBX4P57082 545 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 ZXDBP98169 803 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 TRIP4Q15650 581 aaPredicted RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 CDO1Q16878 200 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 C15orf59Q2T9L4 293 aaPredicted RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 DDX42Q86XP3 938 aaKnown RBP eCLIP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 ADHFE1Q8IWW8 467 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 SLC35G2Q8TBE7 412 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 ZNF564Q8TBZ8 553 aaPredicted RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 FGF14Q92915 247 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 E2F7Q96AV8 911 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 RSPRY1Q96DX4 576 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 ZFRQ96KR1 1074 aaKnown RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 KXD1Q9BQD3 176 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 TRIM7Q9C029 511 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 KCNF1Q9H3M0 494 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 UVRAGQ9P2Y5 699 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 ANAPC7Q9UJX3 599 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 SH3BP1Q9Y3L3 701 aa18.45■□□□□ 0.54
C6orf48-204ENST00000375639 HBS1LQ9Y450 684 aaKnown RBP18.45■□□□□ 0.54
C6orf48-204ENST00000375639 LOC730098B7Z3J9 87 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 IRAK2O43187 625 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 DESP17661 470 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 PSMA2P25787 234 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 PTPN9P43378 593 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 KPNA1P52294 538 aaPredicted RBP18.44■□□□□ 0.54
C6orf48-204ENST00000375639 ZNF143P52747 638 aaPredicted RBP18.44■□□□□ 0.54
C6orf48-204ENST00000375639 OGDHQ02218 1023 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 DEUP1Q05D60 604 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 HTR4Q13639 388 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 RHOT2Q8IXI1 618 aa18.44■□□□□ 0.54
C6orf48-204ENST00000375639 TXLNBQ8N3L3 684 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms