RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MAPK10P53779 464 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 COG7P83436 770 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 DSG1Q02413 1049 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 LGSNQ5TDP6 509 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 CDCA2Q69YH5 1023 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-202ENST00000375597 KCNT2Q6UVM3 1135 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 WDR75Q8IWA0 830 aaKnown RBP12.2□□□□□ -0.46
MCF2L-202ENST00000375597 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 SPATA33Q96N06 139 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-202ENST00000375597 WWP1Q9H0M0 922 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 ASNSD1Q9NWL6 643 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
MCF2L-202ENST00000375597 ANGPTL2Q9UKU9 493 aa12.2□□□□□ -0.46
MCF2L-202ENST00000375597 PPEF2O14830 753 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 PAPSS1O43252 624 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ABHD2P08910 425 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 CCDC130P13994 396 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ACAT1P24752 427 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 MCL1Q07820 350 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 TMEM198Q66K66 360 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ATG16L1Q676U5 607 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ABHD15Q6UXT9 468 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 RPS27LQ71UM5 84 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 STKLD1Q8NE28 680 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 EMID1Q96A84 441 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 IL1RL2Q9HB29 575 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 RNASEH1O60930 286 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 SEC24DO94855 1032 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 LDHAP00338 332 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF286BP0CG31 522 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 GPD1P21695 349 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 SLC25A11Q02978 314 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 DLG1Q12959 904 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 NRF1Q16656 503 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 PID1Q7Z2X4 250 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 SATL1Q86VE3 508 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF354CQ86Y25 554 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 XYLT1Q86Y38 959 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 RAB3IL1Q8TBN0 382 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 SNRNP25Q9BV90 132 aaKnown RBP12.19□□□□□ -0.46
MCF2L-202ENST00000375597 TEX13BQ9BXU2 312 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 PDGFCQ9NRA1 345 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 EURLQ9NYK6 297 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 V9GYQ6 96 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 SCN9AQ15858 1988 aa12.19□□□□□ -0.46
MCF2L-202ENST00000375597 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PHGDHO43175 533 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PYGLP06737 847 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 EPHA3P29320 983 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PLK1P53350 603 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GRIK3Q13003 919 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF280CQ8ND82 737 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GSDMBQ8TAX9 411 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 OMDQ99983 421 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 APOC4-APOC2K7ER74 178 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 OGTO15294 1046 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 TRUB2O95900 331 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 APOC2P02655 101 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 LYNP07948 512 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 MUTP22033 750 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 NAMPTP43490 491 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 BACE1P56817 501 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 MRPS5P82675 430 aaKnown RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 TMED1Q13445 227 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GK3PQ14409 553 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 SLC44A1Q8WWI5 657 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF669Q96BR6 464 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GRIP2Q9C0E4 1043 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 CYP4F12Q9HCS2 524 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 RPS6KL1Q9Y6S9 549 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GPR25O00155 361 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 DKC1O60832 514 aaKnown RBP eCLIP12.18□□□□□ -0.469e-7■■■■■ 41.3
MCF2L-202ENST00000375597 SLC4A1P02730 911 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 GOT1P17174 413 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 CYP2F1P24903 491 aa12.18□□□□□ -0.46
MCF2L-202ENST00000375597 ETFBP38117 255 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms