RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IFNL1Q8IU54 200 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 NDNQ99608 321 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 CCDC106Q9BWC9 280 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 PDLIM7Q9NR12 457 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SOX13Q9UN79 622 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TTLL3Q9Y4R7 772 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 ZNF236Q9UL36 1845 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 PDE5AO76074 875 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TNFSF9P41273 254 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 PDE1BQ01064 536 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 MED21Q13503 144 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 MARK2Q7KZI7 788 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 UBE2OQ9C0C9 1292 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 ZNF518BQ9C0D4 1074 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 CYP4F11Q9HBI6 524 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 JPH1Q9HDC5 661 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 FKBP6O75344 327 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 EIF4BP23588 611 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 MIPP30301 263 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 YWHAZP63104 245 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 STX3Q13277 289 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 ORC1Q13415 861 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TRPC3Q13507 836 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 GRB14Q14449 540 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 LRRC23Q53EV4 343 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 EFHC1Q5JVL4 640 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 DHDDSQ86SQ9 333 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 USP6NLQ92738 828 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 NIF3L1Q9GZT8 377 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 S100A14Q9HCY8 104 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 MAD1L1Q9Y6D9 718 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 SLC15A5A6NIM6 579 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 PGK2P07205 417 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 APRTP07741 180 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 SERPINA6P08185 405 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 RANBP1P43487 201 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TM4SF4P48230 202 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 CDH6P55285 790 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 KCNJ11Q14654 390 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TEX44Q53QW1 395 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 RALGPS1Q5JS13 557 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-203ENST00000374877 LRRN4Q8WUT4 740 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 AZIN2Q96A70 460 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 SIRPGQ9P1W8 387 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
CCDC40-203ENST00000374877 A0A088AWK7 358 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 KCNN4O15554 427 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 BUD23O43709 281 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 RFPL1O75677 317 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 EDN1P05305 212 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 SERPINB6P35237 376 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ACTR2P61160 394 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 SFT2D3Q587I9 215 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ACAD11Q709F0 780 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 XAB2Q9HCS7 855 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 DNAJB4Q9UDY4 337 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ABT1Q9ULW3 272 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 LYPLA1O75608 230 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 KRT38O76015 456 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 SORBS2O94875 1100 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ADORA2AP29274 412 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 TFAMQ00059 246 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 DENND5BQ6ZUT9 1274 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 UBR7Q8N806 425 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 DRAXINQ8NBI3 349 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 FAM172AQ8WUF8 416 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 CYTH4Q9UIA0 394 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 ATG7O95352 703 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 BPGMP07738 259 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 CSH1P0DML2 217 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 CSH2P0DML3 217 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 PEX2P28328 305 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 AQP4P55087 323 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 TBCCQ15814 346 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 KYAT3Q6YP21 454 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 PDSS2Q86YH6 399 aa11.47□□□□□ -0.57
CCDC40-203ENST00000374877 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
CCDC40-203ENST00000374877 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms