RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 KCNK1O00180 336 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 RARBP10826 455 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 TKTP29401 623 aaKnown RBP17.66■□□□□ 0.42
RXRB-201ENST00000374680 ADIGQ0VDE8 80 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 PPP2R5DQ14738 602 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 C9orf57Q5W0N0 161 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 CLNKQ7Z7G1 428 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 FAM13CQ8NE31 585 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 BEST2Q8NFU1 509 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 FAM167BQ9BTA0 163 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 WDR90Q96KV7 1748 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 MEIS3P2A8K0S8 358 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 CCNB1P14635 433 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 GRM5P41594 1212 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 CLNS1AP54105 237 aaKnown RBP17.66■□□□□ 0.42
RXRB-201ENST00000374680 RCN2Q14257 317 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 ACAP1Q15027 740 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 CHI3L2Q15782 390 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 WLSQ5T9L3 541 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
RXRB-201ENST00000374680 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
RXRB-201ENST00000374680 HACE1Q8IYU2 909 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 SLC4A5Q9BY07 1137 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 NFKBIZQ9BYH8 718 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
RXRB-201ENST00000374680 MCM8Q9UJA3 840 aa17.66■□□□□ 0.42
RXRB-201ENST00000374680 CCNA1P78396 465 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 PDK2Q15119 407 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 NPLOC4Q8TAT6 608 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 USP6NLQ92738 828 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 APOPT1Q96IL0 206 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 CSPG4P5Q96PW8 444 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 VRTNQ9H8Y1 702 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 ACSS2Q9NR19 701 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 SIP14410 1827 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 KPNA7A9QM74 516 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 CHADO15335 359 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 TREHO43280 583 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.42
RXRB-201ENST00000374680 AFF1P51825 1210 aaKnown RBP17.65■□□□□ 0.42
RXRB-201ENST00000374680 FBXO47Q5MNV8 452 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 CES4AQ5XG92 561 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 SLC27A1Q6PCB7 646 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 DTLQ9NZJ0 730 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
RXRB-201ENST00000374680 CITO14578 2027 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
RXRB-201ENST00000374680 SULT1E1P49888 294 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 DGKDQ16760 1214 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 TTC39BQ5VTQ0 682 aaPredicted RBP17.65■□□□□ 0.42
RXRB-201ENST00000374680 DPY19L2Q6NUT2 758 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 HFE2Q6ZVN8 426 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 GPR142Q7Z601 462 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 FRMD8P1Q9BZ68 369 aaPredicted RBP17.65■□□□□ 0.42
RXRB-201ENST00000374680 MTMR10Q9NXD2 777 aa17.65■□□□□ 0.42
RXRB-201ENST00000374680 KRT37O76014 449 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 VAV1P15498 845 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 PGGT1BP53609 377 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 BST1Q10588 318 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 PKDCCQ504Y2 493 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 SYPL2Q5VXT5 272 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 KBTBD7Q8WVZ9 684 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 SNX27Q96L92 541 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 NUDCD1Q96RS6 583 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 APOL2Q9BQE5 337 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 MED10Q9BTT4 135 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 VPS11Q9H270 941 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 HAUS5O94927 633 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 APOEP02649 317 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 SMIM10L2AP0DMW4 78 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 SMIM10L2BP0DMW5 78 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
RXRB-201ENST00000374680 NUDCD3Q8IVD9 361 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 DTX3LQ8TDB6 740 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.41
RXRB-201ENST00000374680 MIPEPQ99797 713 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 C20orf27Q9GZN8 174 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 MAF1Q9H063 256 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 NOP53Q9NZM5 478 aaKnown RBP17.64■□□□□ 0.41
RXRB-201ENST00000374680 CPA4Q9UI42 421 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 SNX10Q9Y5X0 201 aa17.64■□□□□ 0.41
RXRB-201ENST00000374680 TM9SF1O15321 606 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 DESP17661 470 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 MLH1P40692 756 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 ETV4P43268 484 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 MRPS5P82675 430 aaKnown RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 SLC9A4Q6AI14 798 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 PPP1R14CQ8TAE6 165 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 MAML3Q96JK9 1138 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 SIGLEC10Q96LC7 697 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 ADAMTS10Q9H324 1103 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 DENND2DQ9H6A0 471 aaPredicted RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 KCNK13Q9HB14 408 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 VTA1Q9NP79 307 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms